Os02g0755600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to UDP-glucuronosyltransferase.
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Os02g0755600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to UDP-glucuronosyltransferase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 230.32 | 0.713 | 8.92 | 1.09 | 0.712 | 2.06 | -1.08 | -2.24 | -0.488 | 1.83 | 1.142 | 7232 | 18 | 4.97 |
| 230.4 | 0.707 | 8.92 | 1.1 | 0.626 | 2.02 | -0.955 | -- | -0.488 | 1.8 | 0.17 | 7260 | 18.1 | 5.9 |
| 224.58 | 0.698 | 8.91 | 1.02 | 0.624 | 2.52 | -- | -2.07 | -0.439 | 4.54 | 1.492 | 7263 | 18 | 5.68 |
| 220.24 | 0.691 | 8.91 | 0.709 | 0.489 | 2.31 | -- | -- | -0.652 | 2.26 | 0.1696 | 7239 | 18.4 | 6.89 |
| 238.14 | 0.719 | 8.91 | 1.18 | -- | 2.35 | -- | -2.87 | -0.44 | -- | 1.372 | 7261 | 18 | 7.5 |
| 330.1 | 0.852 | 8.89 | 1.12 | 0.748 | -- | -1.37 | -- | -0.477 | 0.832 | -- | -- | -- | -- |
| 337.84 | 0.861 | 8.89 | 1.17 | 0.756 | -- | -- | -- | -0.471 | 1.13 | -- | -- | -- | -- |
| 229.3 | 0.705 | 8.92 | 0.745 | -- | 2.51 | -- | -- | -0.681 | -- | 0.1569 | 7254 | 18.4 | 7.18 |
| 233.24 | 0.711 | 8.91 | -- | 0.533 | 2.54 | -- | -- | -0.785 | 2.43 | 0.1704 | 7235 | 18.4 | 6.92 |
| 373.24 | 0.903 | 8.88 | 1.2 | -- | -- | -- | -- | -0.456 | -- | -- | -- | -- | -- |
| 374.01 | 0.905 | 8.92 | -- | 0.775 | -- | -- | -- | -0.602 | 1.19 | -- | -- | -- | -- |
| 243.73 | 0.727 | 8.92 | -- | -- | 2.67 | -- | -- | -0.759 | -- | 0.17 | 7250 | 18.4 | 7.2 |
| 411.26 | 0.947 | 8.91 | -- | -- | -- | -- | -- | -0.589 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 227.68 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 232.17 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 4 | 232.39 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 5 | 232.41 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 10 | 233.23 | humidity | 90 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 11 | 233.66 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 17 | 234.43 | wind | 3 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 22 | 235.24 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 28 | 236.19 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 29 | 236.34 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 31 | 236.36 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 34 | 236.43 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 46 | 237.00 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 48 | 237.25 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 56 | 237.75 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 58 | 237.76 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 63 | 237.87 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 94 | 238.50 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 102 | 238.65 | wind | 3 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 113 | 238.78 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 125 | 239.01 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 129 | 239.05 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 130 | 239.09 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 136 | 239.13 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 137 | 239.14 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 142 | 239.23 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 151 | 239.34 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 153 | 239.37 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 7 | NA |
| 164 | 239.46 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 172 | 239.57 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 200 | 239.68 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 21 | 8 |
| 202 | 239.73 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 222 | 239.90 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 233 | 240.01 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 244 | 240.10 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 255 | 240.15 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 280 | 240.28 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 17 | 11 |
| 338 | 240.45 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 341 | 240.46 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 7 | NA |
| 358 | 240.52 | atmosphere | 1000 | 14400 | > th | dose dependent | sin | 14 | NA |
| 376 | 240.56 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 442 | 240.73 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 470 | 240.81 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 759 | 241.46 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 3 | 22 |
| 771 | 241.49 | atmosphere | 1000 | 14400 | > th | dose dependent | no | NA | NA |
| 807 | 241.54 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 863 | 241.65 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 949 | 241.81 | radiation | 30 | 43200 | < th | dose dependent | rect. | 22 | 7 |