Os02g0755000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os02g0755000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.18 | 0.611 | 8.81 | -2.08 | 1.66 | 1.13 | 1.01 | -0.549 | -0.577 | 20.3 | 90.86 | 27 | -- | -- |
| 169.35 | 0.606 | 8.81 | -2.1 | 1.68 | 1.15 | 1 | -- | -0.599 | 20.3 | 91.76 | 31 | -- | -- |
| 171.11 | 0.609 | 8.81 | -2.04 | 1.68 | 1.25 | -- | -0.571 | -0.576 | 20.5 | 92.81 | 49 | -- | -- |
| 170.3 | 0.608 | 8.82 | -2.11 | 1.73 | 1.61 | -- | -- | -0.629 | 20.5 | 93.8 | 60 | -- | -- |
| 316.98 | 0.834 | 8.78 | -2.09 | -- | 0.784 | -- | -0.379 | -0.644 | -- | 89 | 6 | -- | -- |
| 197.73 | 0.659 | 8.85 | -1.97 | 1.56 | -- | 0.75 | -- | -0.777 | 21.4 | -- | -- | -- | -- |
| 199.79 | 0.662 | 8.85 | -2 | 1.56 | -- | -- | -- | -0.778 | 21.4 | -- | -- | -- | -- |
| 317.24 | 0.83 | 8.78 | -2.1 | -- | 0.778 | -- | -- | -0.645 | -- | 89 | 5 | -- | -- |
| 283.78 | 0.785 | 8.81 | -- | 1.61 | 2.3 | -- | -- | -0.511 | 20.8 | 94.71 | 68 | -- | -- |
| 341.74 | 0.864 | 8.81 | -1.99 | -- | -- | -- | -- | -0.783 | -- | -- | -- | -- | -- |
| 304.7 | 0.817 | 8.8 | -- | 1.55 | -- | -- | -- | -0.555 | 21.3 | -- | -- | -- | -- |
| 432.43 | 0.969 | 8.73 | -- | -- | 0.546 | -- | -- | -0.453 | -- | 88.16 | 9 | -- | -- |
| 445.78 | 0.985 | 8.76 | -- | -- | -- | -- | -- | -0.563 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 159.02 | humidity | 90.0 | 30 | > th | dose independent | rect. | 3 | 4 |
| 5 | 160.89 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 3 | 4 |
| 21 | 162.74 | temperature | 25.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 29 | 163.04 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 3 | 11 |
| 34 | 163.19 | humidity | 90.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 49 | 163.31 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 3 | 19 |
| 88 | 163.91 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 24 | 7 |
| 93 | 163.98 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 138 | 165.59 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 24 | 22 |
| 153 | 165.89 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 10 |
| 160 | 166.00 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 14 |
| 235 | 167.07 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 236 | 167.08 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 21 |
| 237 | 167.08 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 238 | 167.09 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 250 | 167.39 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 257 | 167.46 | temperature | 15.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 267 | 167.63 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 268 | 167.63 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 271 | 167.63 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 274 | 167.63 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 275 | 167.63 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 277 | 167.63 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 312 | 167.98 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 313 | 167.98 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 318 | 168.08 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 20 | 11 |
| 325 | 168.14 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 13 | 18 |
| 331 | 168.18 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 359 | 168.38 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 366 | 168.41 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 373 | 168.45 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 9 | 22 |
| 385 | 168.53 | humidity | 90.0 | 30 | > th | dose independent | sin | 6 | NA |
| 444 | 169.27 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 449 | 169.32 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 3 |
| 451 | 169.32 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 470 | 169.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 22 |
| 471 | 169.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 563 | 169.99 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 570 | 170.02 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 585 | 170.06 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 10 |
| 591 | 170.09 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 603 | 170.15 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 21 | 17 |
| 621 | 170.19 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 632 | 170.23 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 656 | 170.28 | humidity | 90.0 | 30 | > th | dose dependent | no | NA | NA |
| 671 | 170.35 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 6 |
| 676 | 170.37 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 690 | 170.40 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 696 | 170.43 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 700 | 170.45 | radiation | 1.0 | 90 | < th | dose independent | sin | 4 | NA |
| 713 | 170.53 | radiation | 1.0 | 90 | > th | dose independent | sin | 4 | NA |
| 744 | 170.63 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 745 | 170.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 748 | 170.63 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 752 | 170.63 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 757 | 170.63 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 758 | 170.63 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 759 | 170.63 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 763 | 170.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 766 | 170.63 | radiation | 1.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 806 | 170.78 | humidity | 90.0 | 10 | < th | dose independent | sin | 5 | NA |
| 992 | 171.36 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 6 |