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Os02g0753200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0104) R2 : 0.0527
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.11 (0.0219) R2dN8 : 0.068 R2N8 : 0.0527
σ : 0.196
deviance : 17.64
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.66 0.16 12.6 -0.12 0.226 -0.376 -0.015 0.412 -0.163 16.4 50 4016 -- --
11.77 0.16 12.6 -0.152 0.225 -0.248 -0.0329 -- -0.16 16.3 49.03 4000 -- --
11.66 0.159 12.6 -0.12 0.226 -0.376 -- 0.413 -0.163 16.4 50 4015 -- --
11.77 0.16 12.6 -0.152 0.228 -0.244 -- -- -0.157 16.4 49.62 4015 -- --
14.35 0.176 12.6 -0.104 -- -0.442 -- 0.548 -0.176 -- 49 4064 -- --
12.82 0.168 12.6 -0.245 0.239 -- 0.0153 -- -0.132 16.1 -- -- -- --
12.82 0.168 12.6 -0.245 0.24 -- -- -- -0.132 16.1 -- -- -- --
14.59 0.178 12.6 -0.161 -- -0.262 -- -- -0.167 -- 49.15 4049 -- --
12.27 0.163 12.6 -- 0.23 -0.314 -- -- -0.149 16.4 49.23 4020 -- --
15.94 0.187 12.6 -0.255 -- -- -- -- -0.139 -- -- -- -- --
14.4 0.177 12.6 -- 0.244 -- -- -- -0.105 16.1 -- -- -- --
15.07 0.181 12.6 -- -- -0.34 -- -- -0.158 -- 49.65 4060 -- --
17.64 0.196 12.6 -- -- -- -- -- -0.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 9.61 humidity 50.0 270 > th dose independent rect. 5 9
2 9.68 wind 7.0 270 < th dose independent rect. 5 9
4 9.70 temperature 15.0 270 > th dose independent rect. 5 9
5 9.74 precipitation 0.1 270 < th dose independent rect. 5 9
6 9.74 precipitation 0.1 270 < th dose dependent rect. 5 9
8 9.75 atmosphere 995.0 270 > th dose independent rect. 5 9
9 9.75 atmosphere 1015.0 270 < th dose independent rect. 5 9
10 9.75 temperature 10.0 270 > th dose independent rect. 14 15
11 9.79 wind 9.0 270 < th dose independent rect. 14 15
12 9.79 atmosphere 995.0 270 > th dose dependent rect. 24 6
15 9.86 atmosphere 995.0 270 > th dose independent rect. 14 15
19 9.92 precipitation 0.1 270 < th dose independent rect. 14 15
20 9.92 precipitation 0.1 270 < th dose dependent rect. 14 15
21 9.94 precipitation 0.1 270 < th dose independent rect. 18 7
22 9.94 precipitation 0.1 270 < th dose dependent rect. 18 7
23 9.95 radiation 40.0 270 < th dose independent rect. 14 15
24 9.96 wind 9.0 270 < th dose independent rect. 18 7
25 9.96 humidity 60.0 270 > th dose independent rect. 18 7
26 9.96 radiation 1.0 270 < th dose independent rect. 18 7
33 9.96 humidity 50.0 270 > th dose independent rect. 6 18
34 9.96 radiation 10.0 270 < th dose dependent rect. 18 7
37 9.97 temperature 10.0 270 > th dose independent rect. 18 7
42 9.97 temperature 10.0 270 > th dose independent rect. 1 17
43 9.97 atmosphere 995.0 270 > th dose independent rect. 1 17
44 9.97 atmosphere 1015.0 270 < th dose independent rect. 1 17
45 9.97 precipitation 0.1 270 < th dose independent rect. 1 17
49 9.97 precipitation 0.1 270 < th dose dependent rect. 1 17
50 9.98 wind 5.0 270 < th dose independent rect. 24 6
52 10.00 precipitation 0.1 270 < th dose independent rect. 24 6
53 10.00 precipitation 0.1 270 < th dose dependent rect. 24 6
59 10.01 wind 9.0 270 < th dose independent rect. 6 18
61 10.02 temperature 30.0 270 < th dose independent rect. 18 7
63 10.02 precipitation 0.1 270 < th dose independent rect. 6 18
64 10.02 atmosphere 995.0 270 > th dose dependent rect. 1 4
67 10.02 precipitation 0.1 270 < th dose dependent rect. 6 18
68 10.03 atmosphere 995.0 270 > th dose independent rect. 18 7
69 10.03 wind 7.0 270 < th dose independent rect. 19 16
78 10.05 temperature 10.0 270 > th dose independent rect. 24 6
80 10.05 temperature 30.0 270 < th dose independent rect. 24 6
81 10.05 humidity 50.0 270 > th dose independent rect. 24 6
84 10.05 atmosphere 995.0 270 > th dose independent rect. 24 6
85 10.05 atmosphere 1015.0 270 < th dose independent rect. 24 6
86 10.05 radiation 20.0 270 < th dose independent rect. 24 6
90 10.05 humidity 50.0 270 > th dose independent rect. 19 16
92 10.05 wind 9.0 270 < th dose independent rect. 1 17
93 10.05 temperature 10.0 270 > th dose independent rect. 6 18
94 10.05 humidity 50.0 270 > th dose independent rect. 5 20
95 10.05 wind 9.0 270 < th dose dependent rect. 24 6
103 10.06 radiation 40.0 270 < th dose dependent rect. 24 6
113 10.07 radiation 1.0 270 < th dose independent rect. 24 18
118 10.07 wind 9.0 270 < th dose dependent rect. 6 18
130 10.08 wind 9.0 270 < th dose dependent rect. 18 6
143 10.10 temperature 10.0 270 > th dose independent rect. 11 8
144 10.10 atmosphere 1015.0 270 < th dose independent rect. 11 8
145 10.10 radiation 1.0 270 > th dose independent rect. 5 9
152 10.10 temperature 10.0 270 > th dose independent rect. 19 16
153 10.10 atmosphere 995.0 270 > th dose independent rect. 19 16
162 10.10 humidity 50.0 270 > th dose dependent rect. 24 6
165 10.11 radiation 1.0 270 < th dose independent rect. 24 10
168 10.12 wind 5.0 270 < th dose independent rect. 1 4
189 10.13 wind 9.0 270 < th dose dependent rect. 6 7
191 10.14 wind 1.0 270 > th dose independent rect. 11 8
193 10.14 atmosphere 995.0 270 > th dose independent rect. 11 8
212 10.15 precipitation 0.1 270 < th dose independent rect. 19 16
215 10.15 atmosphere 995.0 10 > th dose dependent rect. 2 6
217 10.15 precipitation 0.1 270 < th dose dependent rect. 19 16
219 10.16 precipitation 0.1 270 < th dose independent rect. 1 4
222 10.16 precipitation 0.1 270 < th dose independent rect. 11 8
226 10.16 wind 9.0 270 < th dose independent rect. 5 20
228 10.16 precipitation 0.1 270 < th dose dependent rect. 1 4
230 10.16 radiation 20.0 43200 < th dose dependent rect. 21 6
233 10.16 precipitation 0.1 270 < th dose dependent rect. 11 8
253 10.17 precipitation 0.1 270 < th dose independent rect. 5 20
257 10.17 radiation 1.0 270 < th dose dependent rect. 24 18
258 10.17 precipitation 0.1 270 < th dose dependent rect. 5 20
262 10.18 wind 9.0 270 < th dose independent rect. 11 8
265 10.18 temperature 10.0 270 > th dose dependent rect. 5 8
284 10.19 wind 9.0 270 < th dose dependent rect. 1 4
285 10.19 wind 9.0 10 < th dose dependent rect. 2 6
286 10.19 wind 7.0 90 < th dose dependent rect. 2 6
295 10.20 temperature 10.0 270 > th dose independent rect. 1 4
297 10.20 temperature 30.0 270 < th dose independent rect. 1 4
298 10.20 humidity 50.0 270 > th dose independent rect. 1 4
301 10.20 atmosphere 995.0 270 > th dose independent rect. 1 4
302 10.20 atmosphere 1010.0 270 < th dose independent rect. 1 4
304 10.20 radiation 20.0 270 < th dose independent rect. 1 4
324 10.20 wind 1.0 270 > th dose independent rect. 14 15
333 10.20 temperature 10.0 270 > th dose independent rect. 5 20
345 10.20 radiation 1.0 270 < th dose dependent rect. 1 9
350 10.21 radiation 1.0 270 < th dose independent sin 5 NA
351 10.21 radiation 1.0 270 < th dose independent rect. 1 4
376 10.21 humidity 50.0 270 > th dose dependent rect. 1 4
377 10.21 radiation 1.0 270 < th dose dependent rect. 1 4
384 10.21 temperature 10.0 270 > th dose dependent rect. 24 6
407 10.23 radiation 1.0 270 > th dose independent sin 4 NA
430 10.23 precipitation 0.1 10 < th dose independent rect. 8 18
433 10.23 radiation 1.0 270 < th dose dependent sin 4 NA
447 10.23 precipitation 0.1 10 < th dose dependent rect. 8 18
451 10.24 wind 5.0 10 < th dose independent rect. 2 6
581 10.28 wind 9.0 10 < th dose independent rect. 8 18
694 10.31 temperature 10.0 10 > th dose independent rect. 2 6
697 10.31 temperature 30.0 10 < th dose independent rect. 2 6
698 10.31 humidity 50.0 10 > th dose independent rect. 2 6
700 10.31 atmosphere 995.0 10 > th dose independent rect. 2 6
702 10.31 atmosphere 1015.0 10 < th dose independent rect. 2 6
707 10.31 atmosphere 1015.0 270 < th dose independent rect. 14 15
710 10.31 temperature 10.0 10 > th dose independent rect. 8 18
717 10.31 humidity 50.0 270 > th dose dependent rect. 18 6
724 10.31 radiation 1.0 270 < th dose dependent rect. 23 20
729 10.32 precipitation 0.1 10 < th dose independent rect. 2 6
746 10.32 precipitation 0.1 10 < th dose dependent rect. 2 6
775 10.34 temperature 10.0 270 > th dose dependent rect. 1 4
861 10.36 precipitation 0.1 10 < th dose independent rect. 20 6
885 10.36 radiation 1.0 1440 < th dose dependent rect. 21 6
886 10.36 precipitation 0.1 10 < th dose dependent rect. 20 6
947 10.38 wind 7.0 10 < th dose independent rect. 20 6
956 10.38 radiation 40.0 10 < th dose independent rect. 2 6
976 10.39 wind 9.0 1440 < th dose independent rect. 3 6
979 10.39 temperature 10.0 1440 > th dose independent rect. 3 6
982 10.39 humidity 50.0 1440 > th dose independent rect. 3 6
984 10.39 atmosphere 995.0 1440 > th dose independent rect. 3 6