Os02g0749500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exocyst complex component Sec6 family protein.
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Os02g0749500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exocyst complex component Sec6 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.35 | 0.255 | 10.7 | -0.556 | 0.573 | 0.472 | 0.168 | -1.02 | 0.0626 | 0.912 | 20.72 | 1081 | -- | -- |
| 31.55 | 0.262 | 10.7 | -0.365 | 0.584 | 0.617 | 0.0307 | -- | 0.0999 | 0.848 | 20.6 | 1261 | -- | -- |
| 29.45 | 0.253 | 10.7 | -0.551 | 0.575 | 0.478 | -- | -0.958 | 0.0642 | 0.957 | 20.7 | 1098 | -- | -- |
| 31.49 | 0.261 | 10.7 | -0.372 | 0.597 | 0.625 | -- | -- | 0.102 | 0.875 | 20.6 | 1281 | -- | -- |
| 49.08 | 0.326 | 10.7 | -0.621 | -- | 0.57 | -- | -1.04 | 0.0324 | -- | 20.8 | 976 | -- | -- |
| 40.75 | 0.299 | 10.7 | -0.117 | 0.637 | -- | -0.12 | -- | 0.247 | 0.947 | -- | -- | -- | -- |
| 40.81 | 0.299 | 10.7 | -0.113 | 0.637 | -- | -- | -- | 0.248 | 0.915 | -- | -- | -- | -- |
| 50.73 | 0.332 | 10.7 | -0.414 | -- | 0.842 | -- | -- | 0.103 | -- | 19.61 | 958 | -- | -- |
| 34.49 | 0.274 | 10.7 | -- | 0.592 | 0.477 | -- | -- | 0.17 | 0.889 | 20.65 | 1208 | -- | -- |
| 66.08 | 0.38 | 10.7 | -0.0893 | -- | -- | -- | -- | 0.26 | -- | -- | -- | -- | -- |
| 41.15 | 0.3 | 10.7 | -- | 0.635 | -- | -- | -- | 0.26 | 0.907 | -- | -- | -- | -- |
| 54.15 | 0.343 | 10.7 | -- | -- | 0.566 | -- | -- | 0.137 | -- | 21.3 | 929 | -- | -- |
| 66.29 | 0.38 | 10.7 | -- | -- | -- | -- | -- | 0.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.32 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 5 | 29.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 11 | 29.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 8 |
| 14 | 29.77 | temperature | 20 | 1440 | > th | dose independent | sin | 14 | NA |
| 17 | 29.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 15 |
| 26 | 29.82 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 27 | 29.82 | temperature | 20 | 1440 | < th | dose independent | rect. | 15 | 15 |
| 30 | 29.83 | temperature | 20 | 1440 | < th | dose independent | sin | 14 | NA |
| 35 | 29.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 12 |
| 52 | 29.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 54 | 29.88 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 60 | 29.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 68 | 29.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 6 |
| 75 | 29.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 121 | 29.97 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 149 | 30.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 313 | 30.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 340 | 30.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 21 |
| 465 | 30.45 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 521 | 30.50 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 544 | 30.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 22 |
| 550 | 30.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 563 | 30.54 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 584 | 30.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 607 | 30.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 609 | 30.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 615 | 30.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 623 | 30.60 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 624 | 30.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 674 | 30.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 728 | 30.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 779 | 30.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 856 | 30.82 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 865 | 30.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 912 | 30.86 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 3 |