Os02g0749400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0749400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 242.85 | 0.732 | 8.67 | -2.28 | 2.17 | 2.35 | -1.26 | -3.61 | -1.23 | 1.14 | 19.67 | 636 | 0.0492 | -- |
| 251.47 | 0.739 | 8.6 | -1.61 | 2.17 | 2.24 | -0.644 | -- | -1.01 | 1.22 | 18.71 | 682 | 0.000779 | -- |
| 248.12 | 0.734 | 8.64 | -2.02 | 2.18 | 2.34 | -- | -2.45 | -1.16 | 1.15 | 19.61 | 638 | 0.000874 | -- |
| 252.27 | 0.74 | 8.59 | -1.58 | 2.26 | 2.32 | -- | -- | -1.03 | 1.13 | 18.63 | 660 | 1.5e-06 | -- |
| 369.7 | 0.896 | 8.63 | -2.06 | -- | 1.74 | -- | -1.55 | -1.16 | -- | 17.59 | 1359 | 0.132 | -- |
| 339.33 | 0.864 | 8.49 | -1.04 | 1.29 | -- | -0.935 | -- | -0.588 | 0.862 | -- | -- | -- | -- |
| 342.98 | 0.867 | 8.48 | -1.01 | 1.29 | -- | -- | -- | -0.583 | 0.785 | -- | -- | -- | -- |
| 370.1 | 0.896 | 8.55 | -1.54 | -- | 1.51 | -- | -- | -0.944 | -- | 19.95 | 1308 | 1.77e-06 | -- |
| 312.98 | 0.824 | 8.54 | -- | 2.11 | 1.98 | -- | -- | -0.806 | 0.811 | 18.81 | 586 | 0.00131 | -- |
| 447.2 | 0.988 | 8.46 | -0.961 | -- | -- | -- | -- | -0.559 | -- | -- | -- | -- | -- |
| 369.74 | 0.899 | 8.46 | -- | 1.28 | -- | -- | -- | -0.471 | 0.749 | -- | -- | -- | -- |
| 423.69 | 0.959 | 8.5 | -- | -- | 1.1 | -- | -- | -0.713 | -- | 22.1 | 1265 | 0.0194 | -- |
| 471.55 | 1.01 | 8.44 | -- | -- | -- | -- | -- | -0.453 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 244.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 2 | 244.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 3 | 244.80 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 4 | 245.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 6 | 245.73 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 13 | 247.38 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 17 | 248.43 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 21 |
| 22 | 249.03 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 41 | 250.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 42 | 250.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 80 | 252.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 94 | 253.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 151 | 255.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 227 | 257.83 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 228 | 257.86 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 270 | 259.08 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 306 | 260.27 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 311 | 260.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 15 |
| 340 | 261.09 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 341 | 261.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 11 |
| 370 | 261.72 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 405 | 262.30 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 427 | 262.77 | temperature | 20 | 270 | > th | dose dependent | sin | 0 | NA |
| 577 | 265.55 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 619 | 266.11 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 21 |