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Os02g0749000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.9 (0.0345) R2 : 0.219
β1 : -0.962 (0.127) R2dD : 0.104 R2D : 0.0769
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.08 (0.16) R2dE : 0.0883 R2E : -0.0217
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.487 (0.0757) R2dN8 : 0.102 R2N8 : 0.0654
σ : 0.641
deviance : 189.38
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_____
C
peak time of C : --
E
wheather : humidity
threshold : 68.73
memory length : 7485
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
177.06 0.625 5.91 -0.963 0.0232 -0.947 -0.988 -2.82 0.374 17.3 67.22 6264 -- --
185.61 0.635 5.9 -0.964 0.0397 -1.1 -1.24 -- 0.494 17.5 68.63 7515 -- --
179.4 0.624 5.91 -0.942 0.0202 -0.932 -- -3.04 0.367 18.8 67 6243 -- --
189.35 0.641 5.9 -0.958 0.0276 -1.08 -- -- 0.486 18 69 7496 -- --
179.44 0.624 5.91 -0.96 -- -0.919 -- -3 0.369 -- 67.77 6242 -- --
205.59 0.672 5.93 -0.83 0.0256 -- 1.08 -- 0.358 5.55 -- -- -- --
208.4 0.676 5.93 -0.827 0.0459 -- -- -- 0.353 2.41 -- -- -- --
189.38 0.641 5.9 -0.962 -- -1.08 -- -- 0.487 -- 68.73 7485 -- --
211.32 0.677 5.84 -- 0.000842 -1 -- -- 0.75 17.7 75 4017 -- --
208.53 0.675 5.93 -0.825 -- -- -- -- 0.354 -- -- -- -- --
226.42 0.704 5.91 -- 0.0302 -- -- -- 0.445 1.96 -- -- -- --
205.53 0.668 5.88 -- -- -1 -- -- 0.58 -- 75 2847 -- --
226.47 0.702 5.91 -- -- -- -- -- 0.445 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 173.17 humidity 80.0 1440 < th dose independent rect. 6 6
4 173.79 humidity 80.0 1440 > th dose independent rect. 6 6
5 173.81 humidity 80.0 1440 < th dose independent rect. 3 9
11 174.36 humidity 70.0 1440 > th dose independent rect. 9 3
12 174.40 humidity 80.0 1440 > th dose independent rect. 3 9
13 174.54 precipitation 0.1 4320 < th dose independent rect. 4 3
15 174.54 precipitation 0.1 4320 < th dose dependent rect. 4 3
24 175.03 precipitation 0.1 4320 < th dose independent rect. 4 6
25 175.03 precipitation 0.1 4320 < th dose dependent rect. 4 6
33 175.23 humidity 70.0 1440 > th dose dependent rect. 7 5
36 175.31 humidity 70.0 1440 < th dose independent rect. 9 3
43 175.45 temperature 30.0 270 < th dose dependent rect. 24 6
46 175.55 humidity 70.0 1440 > th dose dependent rect. 9 1
50 175.60 temperature 25.0 270 < th dose independent rect. 24 6
65 176.00 precipitation 0.1 4320 > th dose independent rect. 5 5
71 176.04 precipitation 0.1 4320 > th dose independent rect. 4 3
77 176.13 precipitation 0.1 4320 > th dose dependent rect. 5 5
83 176.23 humidity 90.0 14400 > th dose dependent rect. 7 1
85 176.25 temperature 30.0 270 < th dose dependent rect. 1 4
88 176.35 humidity 90.0 14400 > th dose independent rect. 7 1
91 176.38 precipitation 0.1 4320 > th dose dependent rect. 4 3
93 176.41 humidity 90.0 14400 > th dose dependent rect. 7 3
95 176.43 wind 3.0 14400 < th dose independent rect. 2 2
110 176.66 wind 3.0 14400 > th dose independent rect. 2 2
166 177.30 humidity 80.0 14400 > th dose dependent rect. 9 1
169 177.35 humidity 90.0 14400 > th dose dependent rect. 7 7
185 177.49 humidity 90.0 14400 < th dose independent rect. 7 1
188 177.57 wind 1.0 4320 > th dose independent rect. 17 2
193 177.61 humidity 70.0 1440 > th dose independent rect. 19 17
202 177.67 humidity 90.0 14400 > th dose independent rect. 7 3
258 178.25 precipitation 0.1 4320 < th dose independent rect. 1 16
260 178.25 precipitation 0.1 4320 < th dose dependent rect. 1 16
263 178.31 precipitation 0.1 4320 > th dose independent rect. 1 16
281 178.40 humidity 70.0 1440 < th dose independent rect. 19 17
293 178.50 wind 1.0 1440 < th dose independent rect. 12 1
294 178.50 wind 1.0 1440 < th dose independent rect. 9 10
305 178.55 humidity 90.0 1440 < th dose dependent rect. 3 8
306 178.56 humidity 90.0 1440 > th dose dependent rect. 7 2
352 178.93 humidity 90.0 14400 > th dose independent rect. 7 7
353 178.95 wind 1.0 1440 < th dose independent rect. 11 8
359 179.01 wind 9.0 14400 < th dose independent rect. 5 6
427 179.35 humidity 80.0 14400 > th dose independent rect. 9 2
428 179.35 radiation 1.0 4320 > th dose independent rect. 6 2
434 179.37 precipitation 0.1 4320 < th dose independent rect. 1 11
435 179.37 precipitation 0.1 4320 < th dose dependent rect. 1 11
438 179.42 wind 1.0 1440 < th dose dependent rect. 9 10
440 179.45 wind 1.0 1440 < th dose independent rect. 9 5
444 179.47 wind 1.0 1440 < th dose dependent rect. 11 8
447 179.48 temperature 30.0 90 < th dose dependent rect. 3 4
451 179.49 radiation 1.0 4320 < th dose independent rect. 6 2
453 179.49 precipitation 0.1 4320 > th dose independent rect. 1 12
456 179.52 radiation 1.0 4320 > th dose independent rect. 6 6
457 179.52 humidity 90.0 14400 > th dose independent rect. 7 10
458 179.52 humidity 90.0 1440 < th dose dependent rect. 9 1
461 179.53 wind 1.0 1440 > th dose independent rect. 12 1
468 179.54 humidity 90.0 14400 < th dose independent rect. 7 7
476 179.57 precipitation 0.1 4320 > th dose dependent rect. 1 12
481 179.62 radiation 1.0 4320 < th dose independent rect. 6 6
490 179.64 precipitation 0.1 4320 > th dose dependent rect. 24 17
510 179.74 wind 1.0 4320 < th dose independent rect. 17 2
535 179.84 temperature 25.0 90 < th dose independent rect. 3 4
548 179.89 wind 1.0 1440 > th dose independent rect. 10 9
556 179.92 humidity 50.0 4320 > th dose independent sin 13 NA
560 179.93 precipitation 0.1 14400 < th dose independent rect. 18 1
563 179.93 precipitation 0.1 14400 < th dose dependent rect. 18 1
573 179.97 wind 3.0 1440 < th dose dependent rect. 12 1
580 180.02 humidity 50.0 4320 > th dose independent rect. 15 2
582 180.03 precipitation 0.1 14400 > th dose independent rect. 18 1
596 180.09 precipitation 0.1 4320 < th dose independent sin 4 NA
599 180.09 precipitation 0.1 4320 < th dose dependent sin 4 NA
609 180.13 precipitation 0.1 4320 > th dose independent sin 4 NA
621 180.16 precipitation 0.1 14400 > th dose dependent rect. 18 1
691 180.36 humidity 70.0 4320 < th dose dependent rect. 13 1
722 180.42 humidity 50.0 4320 > th dose independent rect. 14 14
742 180.47 precipitation 0.1 14400 < th dose independent rect. 24 20
743 180.47 precipitation 0.1 14400 < th dose dependent rect. 24 20
745 180.48 humidity 50.0 4320 > th dose independent rect. 14 7
748 180.48 humidity 50.0 4320 > th dose independent rect. 14 9
764 180.49 humidity 50.0 4320 > th dose independent rect. 14 19
765 180.49 precipitation 0.1 14400 > th dose independent rect. 24 20
771 180.51 humidity 50.0 4320 > th dose independent rect. 14 5
785 180.56 wind 1.0 1440 < th dose dependent rect. 9 5
802 180.61 humidity 50.0 4320 < th dose independent sin 14 NA
814 180.63 humidity 80.0 4320 < th dose dependent sin 9 NA
820 180.65 humidity 90.0 14400 > th dose independent rect. 16 1
843 180.72 humidity 50.0 4320 < th dose independent rect. 14 4
869 180.76 humidity 90.0 14400 > th dose dependent rect. 16 1
872 180.76 humidity 70.0 4320 < th dose dependent rect. 12 20
873 180.77 humidity 70.0 4320 < th dose dependent sin 18 NA
879 180.78 humidity 70.0 4320 < th dose dependent rect. 12 23
882 180.79 humidity 90.0 14400 > th dose independent rect. 7 13
887 180.80 humidity 70.0 4320 < th dose dependent rect. 12 7
897 180.80 humidity 80.0 4320 < th dose dependent rect. 21 16
904 180.82 humidity 70.0 4320 < th dose independent sin 6 NA
906 180.82 humidity 70.0 4320 < th dose dependent rect. 9 22
914 180.83 humidity 70.0 4320 < th dose dependent rect. 10 10
976 180.89 humidity 70.0 1440 > th dose independent sin 8 NA