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Os02g0747600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to AP2/EREBP transcription factor BABY BOOM1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0113) R2 : 1.25e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0018 (0.0238) R2dN8 : 1.62e-05 R2N8 : 1.25e-05
σ : 0.213
deviance : 20.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.95 0.175 11.2 0.491 0.154 -4.01 0.18 13.6 0.0297 10.8 0.04691 236 -- --
15.5 0.183 11.3 0.385 0.13 -0.397 0.24 -- 0.0366 10.1 -0.1604 60 -- --
14.08 0.175 11.2 0.494 0.157 -4 -- 13.5 0.0289 10.8 0.0491 239 -- --
15.46 0.183 11.3 0.393 0.137 -0.377 -- -- 0.0397 11 -0.01411 181 -- --
15.5 0.183 11.2 0.499 -- -3.99 -- 13.2 0.0296 -- 0.1141 239 -- --
15.65 0.185 11.3 0.363 0.147 -- 0.229 -- 0.0429 10.6 -- -- -- --
15.87 0.187 11.3 0.373 0.146 -- -- -- 0.0437 10.8 -- -- -- --
15.98 0.186 11.3 0.395 -- -0.585 -- -- 0.0361 -- 1.5 363 -- --
19.42 0.205 11.3 -- 0.138 -0.193 -- -- -0.000881 10.7 -0.1072 192 -- --
17.18 0.194 11.3 0.37 -- -- -- -- 0.0428 -- -- -- -- --
19.53 0.207 11.3 -- 0.143 -- -- -- 0.00221 10.6 -- -- -- --
20.02 0.208 11.3 -- -- -0.421 -- -- 0.00757 -- 1.47 363 -- --
20.78 0.213 11.3 -- -- -- -- -- 0.0018 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.96 radiation 40.0 10 < th dose dependent rect. 6 19
3 13.08 radiation 30.0 90 < th dose independent rect. 6 19
9 13.23 radiation 20.0 10 < th dose independent rect. 6 19
10 13.24 atmosphere 1000.0 30 > th dose independent rect. 6 19
15 13.28 wind 7.0 30 < th dose dependent rect. 6 13
26 13.38 wind 5.0 30 < th dose independent rect. 6 13
28 13.38 wind 5.0 30 < th dose independent rect. 6 19
31 13.40 atmosphere 1015.0 30 < th dose dependent rect. 1 5
32 13.40 wind 7.0 30 < th dose dependent rect. 6 6
34 13.41 temperature 20.0 30 > th dose independent rect. 1 5
42 13.44 wind 7.0 30 < th dose dependent rect. 6 8
45 13.46 wind 5.0 10 < th dose independent rect. 6 6
46 13.46 wind 9.0 30 < th dose dependent rect. 6 19
47 13.47 wind 9.0 1440 < th dose independent rect. 2 5
48 13.47 temperature 10.0 1440 > th dose independent rect. 2 5
51 13.47 temperature 30.0 1440 < th dose independent rect. 2 5
55 13.47 humidity 80.0 30 > th dose independent rect. 1 5
56 13.47 humidity 50.0 1440 > th dose independent rect. 2 5
61 13.47 atmosphere 995.0 1440 > th dose independent rect. 2 5
62 13.47 radiation 40.0 1440 < th dose independent rect. 2 5
66 13.47 temperature 10.0 1440 > th dose independent rect. 7 19
69 13.47 atmosphere 1015.0 270 < th dose dependent rect. 1 2
72 13.48 radiation 40.0 270 < th dose independent rect. 13 11
73 13.48 humidity 50.0 30 > th dose dependent rect. 1 5
82 13.50 wind 9.0 30 < th dose independent rect. 1 5
83 13.50 temperature 10.0 30 > th dose independent rect. 1 5
85 13.50 temperature 30.0 30 < th dose independent rect. 1 5
86 13.50 humidity 50.0 30 > th dose independent rect. 1 5
89 13.50 atmosphere 995.0 30 > th dose independent rect. 1 5
90 13.50 atmosphere 1010.0 30 < th dose independent rect. 1 5
92 13.50 radiation 20.0 30 < th dose independent rect. 1 5
96 13.50 temperature 10.0 30 > th dose independent rect. 6 19
98 13.50 radiation 40.0 270 < th dose independent rect. 4 20
101 13.50 atmosphere 995.0 30 > th dose dependent rect. 6 19
102 13.51 radiation 40.0 30 < th dose dependent rect. 1 5
104 13.51 radiation 40.0 90 < th dose dependent rect. 13 12
136 13.54 precipitation 0.1 30 < th dose independent rect. 6 19
143 13.54 precipitation 0.1 30 < th dose dependent rect. 6 19
161 13.59 precipitation 0.1 30 < th dose independent rect. 1 5
168 13.59 precipitation 0.1 30 < th dose dependent rect. 1 5
174 13.60 precipitation 0.1 270 < th dose independent rect. 2 23
177 13.60 precipitation 0.1 270 < th dose dependent rect. 2 23
196 13.63 radiation 20.0 90 < th dose independent rect. 13 12
212 13.65 temperature 20.0 270 > th dose independent rect. 1 1
214 13.66 precipitation 0.1 270 > th dose independent rect. 17 11
217 13.66 temperature 10.0 30 > th dose dependent rect. 1 5
220 13.66 radiation 30.0 10 < th dose dependent rect. 12 13
227 13.67 humidity 50.0 270 > th dose independent rect. 10 18
229 13.67 humidity 50.0 270 > th dose independent rect. 9 20
243 13.68 radiation 40.0 270 < th dose dependent rect. 4 20
244 13.69 wind 1.0 30 > th dose independent rect. 6 19
270 13.71 radiation 20.0 90 < th dose independent rect. 15 10
310 13.72 radiation 1.0 90 < th dose dependent rect. 1 10
314 13.73 radiation 1.0 90 > th dose independent sin 7 NA
317 13.73 atmosphere 995.0 270 > th dose independent rect. 14 10
319 13.73 radiation 1.0 90 > th dose independent rect. 18 17
353 13.75 temperature 20.0 10 > th dose independent rect. 3 3
362 13.76 radiation 20.0 720 > th dose independent rect. 11 1
370 13.76 atmosphere 995.0 90 > th dose dependent rect. 6 5
372 13.76 radiation 40.0 90 < th dose dependent rect. 15 10
380 13.77 wind 5.0 270 < th dose independent rect. 4 6
383 13.77 atmosphere 1015.0 30 < th dose independent rect. 6 19
389 13.77 atmosphere 995.0 270 > th dose dependent rect. 4 5
396 13.78 radiation 40.0 90 < th dose independent rect. 6 5
398 13.78 precipitation 0.1 270 < th dose independent rect. 14 10
400 13.78 precipitation 0.1 270 > th dose independent rect. 17 16
409 13.78 precipitation 0.1 270 < th dose dependent rect. 14 10
416 13.79 temperature 20.0 30 > th dose independent rect. 14 16
421 13.79 wind 9.0 30 < th dose dependent rect. 1 5
433 13.80 wind 9.0 270 < th dose independent rect. 1 2
434 13.80 temperature 10.0 270 > th dose independent rect. 1 2
436 13.80 temperature 30.0 270 < th dose independent rect. 1 2
437 13.80 humidity 50.0 270 > th dose independent rect. 1 2
440 13.80 atmosphere 995.0 270 > th dose independent rect. 1 2
441 13.80 atmosphere 1010.0 270 < th dose independent rect. 1 2
443 13.80 radiation 1.0 270 < th dose independent rect. 1 2
448 13.80 precipitation 0.1 270 < th dose independent rect. 1 2
450 13.80 wind 1.0 270 > th dose independent rect. 14 10
456 13.80 temperature 10.0 270 > th dose independent rect. 3 22
457 13.80 radiation 1.0 270 < th dose dependent rect. 1 2
462 13.80 precipitation 0.1 270 < th dose dependent rect. 1 2
488 13.82 temperature 10.0 270 > th dose independent rect. 14 10
490 13.82 temperature 10.0 270 > th dose independent rect. 24 14
491 13.82 atmosphere 995.0 270 > th dose independent rect. 24 14
492 13.82 atmosphere 1015.0 270 < th dose independent rect. 24 14
505 13.82 precipitation 0.1 270 > th dose dependent rect. 17 16
526 13.83 radiation 30.0 270 < th dose independent rect. 4 7
528 13.83 wind 5.0 270 < th dose independent rect. 4 14
535 13.83 temperature 20.0 30 > th dose independent rect. 12 18
546 13.83 temperature 30.0 30 < th dose dependent rect. 1 5
554 13.84 precipitation 0.1 270 > th dose independent rect. 2 2
557 13.84 temperature 30.0 270 < th dose independent rect. 4 7
558 13.84 wind 9.0 270 < th dose independent rect. 24 14
567 13.84 precipitation 0.1 30 > th dose independent rect. 3 21
571 13.84 humidity 50.0 270 > th dose dependent rect. 1 1
572 13.84 precipitation 0.1 270 > th dose dependent rect. 2 2
573 13.84 wind 7.0 14400 > th dose dependent rect. 14 3
575 13.84 precipitation 0.1 270 > th dose dependent rect. 17 12
582 13.85 radiation 20.0 270 < th dose independent rect. 4 11
588 13.85 atmosphere 1000.0 10 > th dose dependent rect. 6 5
590 13.85 wind 9.0 270 < th dose dependent rect. 4 7
596 13.86 radiation 1.0 90 < th dose independent sin 6 NA
600 13.86 humidity 70.0 270 > th dose independent rect. 4 12
631 13.87 radiation 1.0 270 > th dose independent rect. 18 15
638 13.87 precipitation 0.1 270 > th dose dependent sin 12 NA
639 13.87 atmosphere 1000.0 270 > th dose dependent rect. 6 1
654 13.88 wind 1.0 270 > th dose independent sin 16 NA
663 13.88 humidity 50.0 270 > th dose independent rect. 24 14
677 13.88 radiation 40.0 10 < th dose dependent rect. 6 8
688 13.89 radiation 1.0 90 > th dose independent rect. 5 6
696 13.89 atmosphere 995.0 270 > th dose dependent rect. 5 3
703 13.89 radiation 40.0 270 < th dose dependent rect. 4 11
706 13.90 wind 9.0 14400 > th dose independent rect. 14 4
730 13.90 precipitation 0.1 90 < th dose independent rect. 16 9
761 13.90 precipitation 0.1 90 < th dose dependent rect. 16 9
769 13.90 precipitation 0.1 270 > th dose dependent rect. 10 19
778 13.91 precipitation 0.1 270 > th dose independent sin 12 NA
779 13.91 radiation 1.0 270 > th dose independent rect. 6 1
826 13.91 precipitation 0.1 270 > th dose dependent rect. 2 20
829 13.91 precipitation 0.1 30 > th dose dependent rect. 3 21
835 13.92 radiation 1.0 270 > th dose independent rect. 5 4
838 13.92 radiation 30.0 10 < th dose independent rect. 6 9
839 13.92 humidity 70.0 10 > th dose independent rect. 18 12
844 13.92 radiation 10.0 90 < th dose dependent sin 9 NA
854 13.92 atmosphere 1015.0 90 < th dose dependent rect. 1 15
867 13.93 wind 9.0 14400 > th dose independent rect. 14 1
869 13.93 wind 1.0 30 > th dose independent rect. 1 5
870 13.93 temperature 30.0 90 < th dose independent rect. 6 5
871 13.93 humidity 90.0 90 < th dose independent rect. 6 5
896 13.93 wind 9.0 270 < th dose independent rect. 3 22
936 13.94 wind 9.0 90 < th dose independent rect. 11 19
977 13.95 temperature 15.0 90 > th dose independent rect. 6 5
978 13.95 atmosphere 1000.0 90 > th dose independent rect. 6 5
980 13.95 wind 9.0 270 < th dose independent rect. 14 10
988 13.95 precipitation 0.1 30 > th dose independent rect. 3 19
997 13.95 radiation 1.0 90 < th dose dependent sin 5 NA
998 13.95 temperature 10.0 270 > th dose dependent rect. 1 1
999 13.95 radiation 1.0 720 > th dose dependent rect. 11 1