Os02g0745400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 8 protein.
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Os02g0745400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 8 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.37 | 0.459 | 10 | 0.889 | 0.479 | -0.289 | -1.24 | -3.56 | 0.0571 | 1.11 | 1005 | 22 | -- | -- |
| 97.5 | 0.463 | 9.99 | 1.03 | 0.468 | -0.943 | -1.17 | -- | 0.04 | 1.17 | 1003 | 13 | -- | -- |
| 100.82 | 0.471 | 10 | 0.948 | 0.502 | -0.365 | -- | -3.07 | 0.0558 | 2.13 | 1005 | 22 | -- | -- |
| 102.29 | 0.474 | 9.98 | 1.07 | 0.494 | -0.937 | -- | -- | 0.0442 | 2.19 | 1003 | 12 | -- | -- |
| 115.46 | 0.503 | 9.99 | 0.998 | -- | -0.48 | -- | -2.47 | 0.0489 | -- | 1006 | 14 | -- | -- |
| 108.99 | 0.489 | 9.98 | 0.936 | 0.489 | -- | -1.16 | -- | 0.0904 | 1.24 | -- | -- | -- | -- |
| 113.65 | 0.499 | 9.97 | 0.973 | 0.514 | -- | -- | -- | 0.0943 | 2.22 | -- | -- | -- | -- |
| 116.77 | 0.503 | 9.98 | 1.09 | -- | -0.986 | -- | -- | 0.0522 | -- | 1003 | 2 | -- | -- |
| 131.65 | 0.537 | 10 | -- | 0.516 | -0.688 | -- | -- | -0.0695 | 2.24 | 1004 | 18 | -- | -- |
| 129.38 | 0.532 | 9.97 | 0.995 | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
| 138.62 | 0.551 | 9.99 | -- | 0.532 | -- | -- | -- | -0.0141 | 2.25 | -- | -- | -- | -- |
| 147.41 | 0.565 | 10 | -- | -- | -0.676 | -- | -- | -0.0905 | -- | 1006 | 2 | -- | -- |
| 155.5 | 0.582 | 9.99 | -- | -- | -- | -- | -- | -0.00368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.11 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 14 |
| 5 | 89.20 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 14 | 89.98 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 16 |
| 21 | 90.53 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 25 | 90.75 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 29 | 90.92 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 32 | 90.97 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 37 | 91.06 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 42 | 91.18 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 44 | 91.19 | humidity | 90.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 65 | 91.54 | wind | 9.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 66 | 91.59 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 70 | 91.75 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 71 | 91.79 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 72 | 91.80 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 76 | 91.82 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 79 | 91.84 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 88 | 91.90 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 95 | 91.95 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 107 | 92.04 | wind | 9.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 108 | 92.04 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 111 | 92.06 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 119 | 92.13 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 21 |
| 121 | 92.13 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 125 | 92.17 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 126 | 92.17 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 129 | 92.17 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 133 | 92.17 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 135 | 92.17 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 138 | 92.17 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 140 | 92.17 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 142 | 92.18 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 150 | 92.21 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 178 | 92.32 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 193 | 92.45 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 3 |
| 194 | 92.45 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 223 | 92.64 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 241 | 92.79 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 263 | 92.93 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 21 | 9 |
| 273 | 93.02 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 276 | 93.05 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 7 | 23 |
| 298 | 93.18 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 311 | 93.23 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 312 | 93.24 | atmosphere | 1000.0 | 30 | > th | dose independent | sin | 1 | NA |
| 319 | 93.25 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 320 | 93.25 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 331 | 93.28 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 335 | 93.29 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 357 | 93.36 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 18 | 12 |
| 385 | 93.46 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 412 | 93.56 | humidity | 90.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 433 | 93.63 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 434 | 93.63 | temperature | 25.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 442 | 93.65 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 483 | 93.76 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 488 | 93.78 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 489 | 93.78 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 492 | 93.78 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 496 | 93.78 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 501 | 93.78 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 502 | 93.78 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 503 | 93.78 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 507 | 93.78 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 516 | 93.81 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 11 | 17 |
| 538 | 93.87 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 3 | 19 |
| 569 | 93.96 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 16 |
| 596 | 94.02 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 18 | 12 |
| 600 | 94.04 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 608 | 94.06 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 8 |
| 620 | 94.09 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 8 |
| 624 | 94.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 626 | 94.10 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 627 | 94.10 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 628 | 94.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 16 |
| 634 | 94.12 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 8 |
| 635 | 94.12 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 656 | 94.16 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 679 | 94.21 | wind | 9.0 | 30 | < th | dose independent | rect. | 6 | 8 |
| 740 | 94.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 744 | 94.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 771 | 94.33 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 7 | 16 |
| 776 | 94.34 | wind | 9.0 | 30 | < th | dose independent | rect. | 14 | 16 |
| 788 | 94.36 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 799 | 94.38 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 865 | 94.44 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 886 | 94.48 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 13 |
| 890 | 94.49 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 893 | 94.49 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 955 | 94.56 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 7 | 18 |
| 975 | 94.59 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 986 | 94.61 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 5 |