Os02g0744000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0744000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.59 | 0.417 | 14.3 | -1.07 | 3.35 | 2.4 | 0.53 | 1.29 | -0.339 | 22.7 | 29.78 | 11 | 21.1 | -- |
| 80.41 | 0.418 | 14.3 | -0.964 | 3.37 | 2.34 | 0.136 | -- | -0.311 | 22.6 | 30 | 12 | 21.3 | -- |
| 79.43 | 0.415 | 14.3 | -1.04 | 3.36 | 2.41 | -- | 0.846 | -0.324 | 22.6 | 29.8 | 14 | 21.2 | -- |
| 80.42 | 0.418 | 14.3 | -0.964 | 3.38 | 2.37 | -- | -- | -0.307 | 22.7 | 29.92 | 12 | 21.1 | -- |
| 160.93 | 0.591 | 14.3 | -1.17 | -- | 3.63 | -- | 1.6 | -0.474 | -- | 48.1 | 172 | 8.04 | -- |
| 127.41 | 0.529 | 14.4 | -1.3 | 2.93 | -- | 0.729 | -- | -0.603 | 23.7 | -- | -- | -- | -- |
| 129.72 | 0.533 | 14.4 | -1.33 | 2.93 | -- | -- | -- | -0.606 | 23.7 | -- | -- | -- | -- |
| 134.41 | 0.54 | 14.3 | -1.21 | -- | 3.2 | -- | -- | -0.615 | -- | 128.4 | 181 | 7.98 | -- |
| 103.77 | 0.474 | 14.3 | -- | 3.47 | 2.77 | -- | -- | -0.162 | 22.5 | 29.86 | 12 | 21.1 | -- |
| 670.25 | 1.21 | 14.3 | -1.24 | -- | -- | -- | -- | -0.571 | -- | -- | -- | -- | -- |
| 176.17 | 0.621 | 14.3 | -- | 2.92 | -- | -- | -- | -0.458 | 23.7 | -- | -- | -- | -- |
| 171.48 | 0.61 | 14.2 | -- | -- | 3.61 | -- | -- | -0.413 | -- | 101.5 | 812 | 13.1 | -- |
| 711.08 | 1.24 | 14.3 | -- | -- | -- | -- | -- | -0.433 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.67 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 6 | 80.93 | temperature | 20 | 10 | > th | dose dependent | sin | 4 | NA |
| 11 | 82.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 10 |
| 16 | 83.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 17 | 83.25 | temperature | 10 | 10 | > th | dose dependent | sin | 3 | NA |
| 51 | 85.54 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 60 | 86.21 | temperature | 25 | 90 | > th | dose independent | sin | 4 | NA |
| 71 | 86.71 | temperature | 25 | 90 | < th | dose independent | sin | 4 | NA |
| 74 | 86.82 | temperature | 25 | 90 | > th | dose independent | rect. | 4 | 10 |
| 88 | 87.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 12 |
| 89 | 87.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 103 | 87.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 104 | 87.51 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 8 |
| 156 | 88.63 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 9 |
| 161 | 88.77 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 12 |
| 179 | 89.44 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 205 | 89.94 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 216 | 90.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 10 |
| 223 | 90.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 17 |
| 241 | 90.78 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 332 | 92.42 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 16 |
| 461 | 94.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 16 |
| 465 | 94.22 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 15 |
| 474 | 94.31 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 7 |
| 586 | 95.37 | temperature | 25 | 90 | > th | dose independent | rect. | 22 | 16 |
| 623 | 95.64 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 8 |
| 760 | 96.83 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 10 |
| 886 | 98.00 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 12 |