Os02g0743200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0743200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.01 | 0.515 | 8.61 | 0.0898 | 1.12 | 2.62 | 0.177 | 4.3 | 0.384 | 23.6 | 0.89 | 1456 | -- | -- |
| 118.31 | 0.507 | 8.54 | 0.486 | 0.943 | 2 | 0.42 | -- | 0.548 | 22.9 | 3.299 | 1500 | -- | -- |
| 120.03 | 0.51 | 8.61 | 0.0864 | 1.08 | 2.63 | -- | 4.29 | 0.381 | 23.7 | 0.926 | 1462 | -- | -- |
| 118 | 0.506 | 8.54 | 0.411 | 0.994 | 1.87 | -- | -- | 0.495 | 23.6 | 3.279 | 1485 | -- | -- |
| 143.33 | 0.558 | 8.52 | 0.353 | -- | 3.3 | -- | 2.96 | 0.554 | -- | 2.196 | 1577 | -- | -- |
| 160.52 | 0.594 | 8.6 | 0.112 | 1.2 | -- | 0.161 | -- | 0.227 | 23.6 | -- | -- | -- | -- |
| 160.63 | 0.594 | 8.6 | 0.105 | 1.2 | -- | -- | -- | 0.226 | 23.6 | -- | -- | -- | -- |
| 139.42 | 0.55 | 8.49 | 0.49 | -- | 2.71 | -- | -- | 0.569 | -- | 3.17 | 1601 | -- | -- |
| 121.9 | 0.514 | 8.54 | -- | 0.981 | 1.7 | -- | -- | 0.457 | 23.6 | 3.989 | 1494 | -- | -- |
| 251.58 | 0.741 | 8.57 | 0.138 | -- | -- | -- | -- | 0.239 | -- | -- | -- | -- | -- |
| 160.92 | 0.593 | 8.6 | -- | 1.2 | -- | -- | -- | 0.214 | 23.6 | -- | -- | -- | -- |
| 145 | 0.561 | 8.51 | -- | -- | 2.55 | -- | -- | 0.503 | -- | 3.571 | 1614 | -- | -- |
| 252.09 | 0.741 | 8.57 | -- | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.62 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 3 | 117.85 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 7 | 118.03 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 8 | 118.08 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 11 | 118.21 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 12 | 118.24 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 19 | 118.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 20 | 118.48 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 77 | 119.16 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 13 |
| 87 | 119.67 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 19 |
| 90 | 119.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 16 |
| 94 | 119.71 | radiation | 1 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 109 | 119.82 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 19 |
| 110 | 119.82 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 167 | 120.29 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 22 |
| 172 | 120.31 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 178 | 120.34 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 202 | 120.66 | radiation | 1 | 1440 | < th | dose independent | sin | 23 | NA |
| 208 | 120.77 | radiation | 1 | 1440 | > th | dose independent | sin | 22 | NA |
| 214 | 120.86 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 238 | 121.42 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 244 | 121.54 | temperature | 25 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 249 | 121.60 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 265 | 121.70 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 6 |
| 268 | 121.72 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 313 | 121.83 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 319 | 121.85 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 321 | 121.85 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 325 | 121.87 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 332 | 121.89 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 15 |
| 346 | 121.92 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 13 |
| 356 | 121.92 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 22 |
| 361 | 121.93 | temperature | 25 | 14400 | > th | dose dependent | sin | 18 | NA |
| 456 | 122.00 | temperature | 25 | 14400 | > th | dose dependent | rect. | 11 | 12 |
| 471 | 122.00 | temperature | 25 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 472 | 122.00 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 474 | 122.01 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 501 | 122.02 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 527 | 122.03 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 544 | 122.05 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 602 | 122.10 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 612 | 122.11 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 614 | 122.11 | temperature | 25 | 14400 | > th | dose dependent | rect. | 8 | 4 |
| 621 | 122.12 | radiation | 1 | 1440 | < th | dose independent | rect. | 3 | 15 |
| 639 | 122.14 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 13 |
| 645 | 122.15 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 646 | 122.15 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 647 | 122.15 | radiation | 1 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 670 | 122.18 | temperature | 25 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 683 | 122.20 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 699 | 122.22 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 706 | 122.23 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 19 |
| 749 | 122.29 | radiation | 1 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 755 | 122.30 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 760 | 122.30 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 831 | 122.39 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 838 | 122.40 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 22 |
| 844 | 122.41 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 936 | 122.57 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 952 | 122.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 957 | 122.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 960 | 122.63 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 16 |
| 1000 | 122.72 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 23 |