Os02g0742800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0742800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.6 | 0.545 | 4.41 | -0.648 | 0.999 | -0.599 | -0.884 | -1.72 | 0.0349 | 6.81 | 81.97 | 5449 | -- | -- |
| 138.64 | 0.548 | 4.4 | -0.581 | 1 | -0.714 | -0.795 | -- | 0.0845 | 6.76 | 83.96 | 5460 | -- | -- |
| 136.52 | 0.544 | 4.4 | -0.656 | 1.01 | -0.598 | -- | -1.64 | 0.0404 | 6.83 | 82 | 5518 | -- | -- |
| 140.38 | 0.552 | 4.4 | -0.597 | 0.995 | -0.716 | -- | -- | 0.0841 | 6.81 | 83.5 | 5448 | -- | -- |
| 179.43 | 0.624 | 4.41 | -0.716 | -- | -1.15 | -- | -1.16 | 0.181 | -- | 88.01 | 4975 | -- | -- |
| 145.46 | 0.565 | 4.42 | -0.567 | 1.01 | -- | -0.813 | -- | -0.0157 | 6.98 | -- | -- | -- | -- |
| 147.17 | 0.568 | 4.42 | -0.582 | 1.01 | -- | -- | -- | -0.0135 | 7.03 | -- | -- | -- | -- |
| 181.2 | 0.627 | 4.39 | -0.626 | -- | -1.21 | -- | -- | 0.224 | -- | 87.74 | 4993 | -- | -- |
| 149.17 | 0.569 | 4.4 | -- | 0.933 | -0.694 | -- | -- | 0.0741 | 6.93 | 77.29 | 5124 | -- | -- |
| 200.49 | 0.662 | 4.44 | -0.562 | -- | -- | -- | -- | 0.00488 | -- | -- | -- | -- | -- |
| 156.09 | 0.584 | 4.41 | -- | 1 | -- | -- | -- | 0.0513 | 7.07 | -- | -- | -- | -- |
| 190.37 | 0.643 | 4.39 | -- | -- | -1.17 | -- | -- | 0.247 | -- | 85 | 4984 | -- | -- |
| 208.81 | 0.674 | 4.43 | -- | -- | -- | -- | -- | 0.0672 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.28 | humidity | 80 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 10 | 130.83 | humidity | 80 | 4320 | > th | dose independent | rect. | 3 | 7 |
| 22 | 131.27 | humidity | 80 | 4320 | < th | dose dependent | rect. | 2 | 7 |
| 25 | 131.28 | humidity | 80 | 4320 | < th | dose dependent | rect. | 23 | 11 |
| 56 | 131.84 | humidity | 80 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 74 | 132.17 | humidity | 60 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 134 | 132.84 | humidity | 50 | 4320 | > th | dose dependent | rect. | 5 | 6 |
| 145 | 132.92 | humidity | 80 | 4320 | < th | dose dependent | sin | 8 | NA |
| 148 | 132.94 | humidity | 90 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 176 | 133.17 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 14 |
| 213 | 133.30 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 14 |
| 308 | 133.71 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 323 | 133.80 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 4 |
| 387 | 134.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 417 | 134.15 | humidity | 80 | 4320 | < th | dose independent | sin | 6 | NA |
| 429 | 134.20 | humidity | 50 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 438 | 134.23 | wind | 1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 481 | 134.36 | humidity | 70 | 4320 | > th | dose independent | sin | 8 | NA |
| 485 | 134.36 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 570 | 134.55 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 611 | 134.65 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 612 | 134.65 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 617 | 134.65 | wind | 3 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 626 | 134.68 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 13 | 8 |
| 707 | 134.81 | humidity | 50 | 4320 | > th | dose independent | rect. | 11 | 6 |
| 724 | 134.81 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 10 | 13 |
| 738 | 134.83 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 6 |
| 741 | 134.84 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 759 | 134.86 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 761 | 134.86 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 768 | 134.86 | humidity | 60 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 774 | 134.87 | temperature | 20 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 779 | 134.88 | humidity | 50 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 848 | 134.93 | humidity | 50 | 4320 | > th | dose independent | rect. | 11 | 14 |
| 861 | 134.94 | humidity | 50 | 4320 | > th | dose independent | rect. | 11 | 11 |
| 866 | 134.94 | humidity | 50 | 4320 | > th | dose independent | rect. | 11 | 19 |
| 868 | 134.94 | humidity | 50 | 4320 | > th | dose independent | rect. | 11 | 22 |
| 910 | 134.99 | radiation | 10 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 926 | 135.00 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 951 | 135.03 | humidity | 50 | 4320 | > th | dose independent | sin | 20 | NA |
| 962 | 135.04 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 13 | 8 |
| 963 | 135.04 | atmosphere | 1015 | 4320 | > th | dose dependent | sin | 20 | NA |
| 975 | 135.05 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 997 | 135.06 | humidity | 50 | 4320 | > th | dose independent | rect. | 24 | 17 |