Os02g0742100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0742100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.96 | 0.23 | 11.9 | 1.56 | 0.368 | 0.822 | 0.168 | -0.894 | 0.449 | 7.51 | 29.3 | 91 | -- | -- |
| 24.99 | 0.233 | 11.9 | 1.41 | 0.366 | 0.847 | 0.189 | -- | 0.415 | 7.7 | 28.89 | 87 | -- | -- |
| 24.03 | 0.228 | 11.9 | 1.56 | 0.371 | 0.825 | -- | -0.889 | 0.45 | 7.5 | 29.3 | 88 | -- | -- |
| 25.08 | 0.233 | 11.9 | 1.41 | 0.367 | 0.838 | -- | -- | 0.414 | 7.57 | 28.88 | 89 | -- | -- |
| 28.98 | 0.251 | 11.9 | 1.68 | -- | 1.14 | -- | -1.52 | 0.465 | -- | 51.12 | 284 | -- | -- |
| 34.52 | 0.275 | 12 | 1.21 | 0.521 | -- | -0.0181 | -- | 0.239 | 5.63 | -- | -- | -- | -- |
| 34.52 | 0.275 | 12 | 1.2 | 0.521 | -- | -- | -- | 0.24 | 5.63 | -- | -- | -- | -- |
| 30.19 | 0.256 | 11.9 | 1.4 | -- | 0.993 | -- | -- | 0.414 | -- | 30.72 | 265 | -- | -- |
| 71.93 | 0.397 | 12 | -- | 0.496 | 0.234 | -- | -- | 0.147 | 6 | 28.88 | 89 | -- | -- |
| 48.6 | 0.326 | 12 | 1.22 | -- | -- | -- | -- | 0.252 | -- | -- | -- | -- | -- |
| 72.79 | 0.399 | 12 | -- | 0.54 | -- | -- | -- | 0.105 | 5.53 | -- | -- | -- | -- |
| 81.96 | 0.422 | 12 | -- | -- | 0.612 | -- | -- | 0.185 | -- | 43.78 | 274 | -- | -- |
| 87.97 | 0.438 | 12 | -- | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.05 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 7 | 23.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 15 | 23.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 25 | 23.62 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 33 | 23.80 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 45 | 24.04 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 49 | 24.10 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 56 | 24.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 60 | 24.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 65 | 24.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 89 | 24.42 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 94 | 24.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 106 | 24.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 111 | 24.61 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 137 | 24.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 141 | 24.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 154 | 24.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 161 | 24.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 266 | 25.35 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 329 | 25.52 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 420 | 25.85 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 454 | 25.90 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 472 | 25.94 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 511 | 26.02 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 516 | 26.02 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 580 | 26.12 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 598 | 26.15 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 23 |
| 602 | 26.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 629 | 26.21 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 669 | 26.26 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 21 |
| 681 | 26.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 686 | 26.28 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 728 | 26.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 765 | 26.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 787 | 26.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 790 | 26.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 798 | 26.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 835 | 26.42 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 845 | 26.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 860 | 26.44 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 874 | 26.45 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 875 | 26.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |