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Os02g0741500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ribbon-helix-helix domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.85 (0.0251) R2 : 0.362
β1 : 1.19 (0.0919) R2dD : 0.245 R2D : 0.249
β2 : 0.551 (0.0615) R2dC : 0.113 R2C : 0.11
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0476 (0.0536) R2dN8 : 0.00148 R2N8 : 0.00674
σ : 0.472
deviance : 101.65
__
_____
C
peak time of C : 9.55
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
93.95 0.455 6.84 1.19 0.537 0.816 -0.13 -0.455 -0.00139 10.5 82.99 1719 -- --
94.15 0.452 6.84 1.17 0.542 0.796 -0.0935 -- -0.00804 10.4 83 1719 -- --
94.02 0.452 6.84 1.19 0.536 0.813 -- -0.424 -0.00172 10.5 83 1723 -- --
94.17 0.452 6.84 1.16 0.528 0.777 -- -- -0.00315 10.5 82.93 1757 -- --
98.78 0.463 6.85 1.26 -- 1.14 -- -0.72 0.0437 -- 80 2234 -- --
101.54 0.472 6.85 1.2 0.55 -- -0.172 -- -0.0475 9.5 -- -- -- --
101.65 0.472 6.85 1.19 0.551 -- -- -- -0.0476 9.55 -- -- -- --
99.91 0.466 6.86 1.19 -- 1.02 -- -- 0.0154 -- 80 2234 -- --
128.21 0.527 6.86 -- 0.441 0.923 -- -- -0.0337 10.6 84 1909 -- --
119.52 0.511 6.86 1.19 -- -- -- -- -0.0462 -- -- -- -- --
139.21 0.552 6.88 -- 0.549 -- -- -- -0.181 9.38 -- -- -- --
134.91 0.541 6.88 -- -- 1.1 -- -- -0.0963 -- 81.75 2160 -- --
156.86 0.585 6.89 -- -- -- -- -- -0.178 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 89.48 wind 3.0 90 < th dose independent rect. 4 21
2 89.48 temperature 10.0 90 > th dose dependent rect. 17 11
3 89.71 temperature 20.0 90 > th dose dependent rect. 1 3
15 91.33 temperature 20.0 90 > th dose independent rect. 2 1
21 91.68 wind 3.0 90 < th dose dependent rect. 2 1
22 91.68 radiation 1.0 43200 < th dose dependent rect. 3 1
25 91.76 radiation 1.0 720 < th dose independent rect. 17 8
27 91.82 radiation 1.0 720 < th dose dependent rect. 17 8
33 91.94 wind 5.0 90 < th dose dependent rect. 4 21
42 92.29 wind 9.0 90 < th dose independent rect. 3 23
45 92.38 radiation 1.0 4320 < th dose dependent rect. 3 1
49 92.41 wind 9.0 1440 < th dose independent rect. 3 1
50 92.41 temperature 10.0 1440 > th dose independent rect. 3 1
53 92.41 temperature 30.0 1440 < th dose independent rect. 3 1
57 92.41 humidity 50.0 1440 > th dose independent rect. 3 1
66 92.41 atmosphere 995.0 1440 > th dose independent rect. 3 1
67 92.41 radiation 1.0 1440 < th dose independent rect. 3 1
87 92.41 temperature 10.0 1440 > th dose independent rect. 4 23
101 92.42 precipitation 0.1 720 < th dose independent rect. 1 18
104 92.42 precipitation 0.1 720 < th dose dependent rect. 1 18
113 92.55 wind 9.0 43200 < th dose dependent rect. 24 3
114 92.57 humidity 80.0 90 > th dose independent rect. 2 1
115 92.57 atmosphere 1015.0 1440 < th dose independent rect. 3 1
117 92.57 radiation 1.0 720 > th dose independent rect. 16 13
119 92.59 radiation 1.0 720 > th dose independent rect. 16 3
131 92.62 wind 3.0 90 < th dose independent rect. 2 1
133 92.67 radiation 1.0 720 > th dose independent rect. 16 20
134 92.67 wind 9.0 90 < th dose dependent rect. 4 21
135 92.70 radiation 1.0 720 > th dose independent rect. 17 1
136 92.73 temperature 20.0 90 > th dose independent rect. 1 3
142 92.76 wind 1.0 10 > th dose independent rect. 23 9
145 92.79 wind 1.0 43200 > th dose dependent rect. 24 3
146 92.82 wind 9.0 10 < th dose independent rect. 3 23
152 92.99 humidity 50.0 90 > th dose dependent rect. 2 1
156 93.04 precipitation 0.1 90 < th dose independent rect. 2 1
157 93.04 precipitation 0.1 90 < th dose dependent rect. 2 1
161 93.05 temperature 10.0 90 > th dose independent rect. 2 1
163 93.05 temperature 30.0 90 < th dose independent rect. 2 1
164 93.05 humidity 50.0 90 > th dose independent rect. 2 1
167 93.05 atmosphere 995.0 90 > th dose independent rect. 2 1
168 93.05 atmosphere 1010.0 90 < th dose independent rect. 2 1
170 93.05 radiation 1.0 90 < th dose independent rect. 2 1
176 93.05 temperature 10.0 90 > th dose independent rect. 3 23
178 93.05 radiation 1.0 90 < th dose dependent rect. 2 1
184 93.08 precipitation 0.1 720 < th dose independent rect. 6 23
185 93.08 precipitation 0.1 720 < th dose dependent rect. 6 23
191 93.13 atmosphere 995.0 90 > th dose dependent rect. 2 1
206 93.16 humidity 80.0 90 > th dose dependent rect. 4 21
223 93.30 temperature 10.0 720 > th dose dependent rect. 16 3
224 93.31 temperature 15.0 90 > th dose independent rect. 17 11
235 93.40 wind 3.0 43200 < th dose independent rect. 24 3
245 93.49 temperature 25.0 10 < th dose independent rect. 2 1
250 93.54 humidity 80.0 1440 > th dose dependent rect. 4 10
251 93.55 humidity 80.0 10 > th dose independent rect. 2 1
256 93.57 wind 3.0 720 > th dose independent rect. 16 5
257 93.58 wind 1.0 720 > th dose independent rect. 9 10
260 93.60 temperature 25.0 720 > th dose dependent rect. 16 3
264 93.61 wind 7.0 43200 < th dose dependent rect. 23 5
274 93.64 wind 9.0 10 < th dose independent rect. 2 1
275 93.64 wind 3.0 43200 < th dose independent rect. 2 1
276 93.64 temperature 10.0 10 > th dose independent rect. 2 1
279 93.64 humidity 50.0 10 > th dose independent rect. 2 1
282 93.64 atmosphere 995.0 10 > th dose independent rect. 2 1
283 93.64 atmosphere 1010.0 10 < th dose independent rect. 2 1
285 93.64 radiation 1.0 10 < th dose independent rect. 2 1
290 93.64 precipitation 0.1 10 < th dose independent rect. 2 1
292 93.64 radiation 1.0 10 < th dose dependent rect. 2 1
297 93.64 precipitation 0.1 10 < th dose dependent rect. 2 1
298 93.65 atmosphere 1005.0 10 > th dose independent rect. 2 1
302 93.66 humidity 50.0 10 > th dose dependent rect. 2 1
303 93.66 atmosphere 995.0 10 > th dose dependent rect. 2 1
309 93.67 precipitation 0.1 720 < th dose independent rect. 7 21
315 93.67 precipitation 0.1 720 < th dose dependent rect. 7 21
317 93.69 wind 5.0 10 < th dose independent rect. 2 1
321 93.69 precipitation 0.1 30 < th dose independent rect. 3 23
323 93.69 atmosphere 1015.0 30 < th dose dependent rect. 2 1
326 93.69 precipitation 0.1 30 < th dose dependent rect. 3 23
327 93.70 wind 1.0 10 < th dose independent rect. 2 1
362 93.73 wind 1.0 30 > th dose independent rect. 2 1
365 93.73 wind 3.0 43200 > th dose independent rect. 24 4
367 93.73 temperature 30.0 30 < th dose dependent rect. 2 1
394 93.78 humidity 80.0 720 > th dose dependent rect. 4 20
395 93.79 precipitation 0.1 90 < th dose independent rect. 1 14
398 93.79 precipitation 0.1 90 < th dose dependent rect. 1 14
401 93.81 wind 3.0 720 > th dose independent rect. 16 3
402 93.81 precipitation 0.1 720 < th dose independent rect. 11 16
405 93.81 precipitation 0.1 1440 > th dose dependent rect. 5 2
407 93.81 precipitation 0.1 720 < th dose dependent rect. 11 16
409 93.82 wind 1.0 43200 > th dose dependent rect. 23 5
415 93.84 humidity 80.0 1440 > th dose dependent sin 2 NA
416 93.84 humidity 80.0 720 > th dose dependent rect. 4 18
424 93.87 precipitation 0.1 720 < th dose independent rect. 15 14
428 93.87 precipitation 0.1 720 < th dose dependent rect. 15 14
431 93.89 humidity 70.0 1440 > th dose dependent sin 4 NA
436 93.90 precipitation 0.1 90 < th dose independent rect. 17 11
438 93.90 precipitation 0.1 90 < th dose dependent rect. 17 11
440 93.91 precipitation 0.1 1440 > th dose independent rect. 5 2
448 93.93 humidity 80.0 720 > th dose dependent rect. 4 16
465 93.97 wind 3.0 43200 > th dose independent rect. 2 1
472 93.98 humidity 80.0 1440 > th dose dependent rect. 4 14
473 93.98 temperature 30.0 30 < th dose dependent rect. 15 17
480 94.01 precipitation 0.1 720 < th dose independent rect. 6 15
484 94.01 precipitation 0.1 720 < th dose dependent rect. 6 15
494 94.04 temperature 25.0 720 > th dose dependent rect. 16 16
499 94.06 wind 1.0 720 > th dose independent rect. 15 8
500 94.06 radiation 10.0 90 < th dose independent rect. 7 21
503 94.07 atmosphere 1000.0 30 > th dose independent rect. 3 23
508 94.08 wind 9.0 90 < th dose independent rect. 15 10
513 94.08 temperature 30.0 90 < th dose dependent rect. 18 14
516 94.09 humidity 70.0 1440 > th dose dependent rect. 21 17
533 94.13 precipitation 0.1 720 < th dose independent rect. 15 22
537 94.13 precipitation 0.1 720 < th dose dependent rect. 15 22
538 94.14 humidity 80.0 1440 > th dose dependent rect. 6 2
542 94.15 radiation 1.0 720 < th dose independent rect. 4 20
546 94.16 wind 3.0 720 > th dose independent rect. 8 15
556 94.19 radiation 1.0 4320 < th dose independent rect. 18 13
570 94.21 wind 3.0 720 > th dose independent rect. 9 12
581 94.23 humidity 80.0 720 < th dose independent rect. 16 3
591 94.24 humidity 50.0 90 > th dose independent rect. 4 13
618 94.28 wind 3.0 720 < th dose independent rect. 4 20
619 94.28 wind 3.0 30 > th dose independent rect. 17 23
645 94.32 radiation 10.0 90 < th dose dependent rect. 7 21
646 94.33 wind 9.0 14400 < th dose independent rect. 8 3
657 94.35 wind 9.0 90 < th dose independent rect. 4 13
676 94.38 radiation 1.0 4320 < th dose independent rect. 6 1
678 94.38 humidity 80.0 1440 > th dose independent rect. 21 17
688 94.40 radiation 1.0 4320 > th dose independent rect. 6 1
731 94.44 temperature 30.0 90 < th dose independent rect. 4 13
732 94.44 wind 3.0 720 < th dose independent rect. 8 16
746 94.46 precipitation 0.1 720 < th dose independent rect. 11 8
747 94.46 precipitation 0.1 720 < th dose independent rect. 15 8
748 94.46 radiation 1.0 4320 > th dose independent rect. 18 13
750 94.46 precipitation 0.1 720 < th dose dependent rect. 11 8
751 94.46 precipitation 0.1 720 < th dose dependent rect. 15 8
785 94.50 wind 1.0 10 > th dose independent rect. 21 11
789 94.50 precipitation 0.1 1440 > th dose dependent rect. 13 1
807 94.52 temperature 10.0 90 > th dose independent rect. 15 10
808 94.52 temperature 10.0 90 > th dose independent rect. 1 14
809 94.52 atmosphere 995.0 90 > th dose independent rect. 1 14
810 94.52 atmosphere 1015.0 90 < th dose independent rect. 1 14
811 94.52 wind 1.0 720 > th dose dependent rect. 17 2
814 94.52 precipitation 0.1 1440 > th dose dependent rect. 5 8
816 94.53 precipitation 0.1 90 < th dose independent rect. 1 3
819 94.53 precipitation 0.1 90 < th dose dependent rect. 1 3
850 94.56 radiation 20.0 90 < th dose independent rect. 17 11
853 94.56 temperature 10.0 90 > th dose independent rect. 4 13
854 94.56 atmosphere 1015.0 90 < th dose independent rect. 4 13
858 94.57 wind 1.0 720 > th dose independent rect. 11 8
878 94.59 precipitation 0.1 720 < th dose independent rect. 16 11
879 94.59 humidity 80.0 1440 < th dose independent rect. 21 17
882 94.59 radiation 1.0 720 > th dose dependent rect. 17 2
894 94.59 precipitation 0.1 720 < th dose dependent rect. 16 11
899 94.60 humidity 80.0 1440 > th dose independent sin 5 NA
999 94.68 radiation 10.0 90 < th dose independent rect. 12 16