Os02g0741100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chaperone protein dnaJ 16 (Protein ARG1-LIKE1) (AtARL1) (AtJ16) (AtDjB16).
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Os02g0741100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chaperone protein dnaJ 16 (Protein ARG1-LIKE1) (AtARL1) (AtJ16) (AtDjB16).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.61 | 0.208 | 10.9 | 0.231 | 0.208 | 0.681 | 0.298 | 0.0918 | 0.255 | 3.86 | 14.35 | 238 | -- | -- |
| 19.62 | 0.206 | 10.9 | 0.236 | 0.215 | 0.674 | 0.38 | -- | 0.258 | 3.68 | 14.53 | 238 | -- | -- |
| 19.72 | 0.207 | 10.9 | 0.234 | 0.209 | 0.682 | -- | 0.249 | 0.263 | 4.23 | 14.37 | 232 | -- | -- |
| 20.04 | 0.208 | 10.9 | 0.228 | 0.195 | 0.704 | -- | -- | 0.255 | 4.48 | 14.17 | 230 | -- | -- |
| 20.09 | 0.209 | 10.9 | 0.226 | -- | 0.834 | -- | 0.303 | 0.26 | -- | 12.61 | 278 | -- | -- |
| 24.84 | 0.234 | 10.9 | 0.201 | 0.892 | -- | 0.433 | -- | 0.221 | 2.38 | -- | -- | -- | -- |
| 25.53 | 0.237 | 10.9 | 0.189 | 0.893 | -- | -- | -- | 0.219 | 2.38 | -- | -- | -- | -- |
| 20.48 | 0.211 | 10.9 | 0.228 | -- | 0.84 | -- | -- | 0.263 | -- | 12.94 | 278 | -- | -- |
| 21.38 | 0.215 | 10.9 | -- | 0.212 | 0.677 | -- | -- | 0.229 | 4.15 | 13.32 | 235 | -- | -- |
| 72.74 | 0.399 | 10.9 | 0.227 | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
| 26.47 | 0.241 | 10.9 | -- | 0.897 | -- | -- | -- | 0.198 | 2.38 | -- | -- | -- | -- |
| 21.78 | 0.217 | 10.9 | -- | -- | 0.83 | -- | -- | 0.232 | -- | 11.36 | 286 | -- | -- |
| 74.09 | 0.402 | 10.9 | -- | -- | -- | -- | -- | 0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.41 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 18 |
| 18 | 18.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 21 | 18.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 34 | 18.86 | humidity | 70 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 54 | 19.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 62 | 19.22 | temperature | 20 | 30 | > th | dose dependent | rect. | 7 | 11 |
| 69 | 19.29 | temperature | 30 | 30 | < th | dose dependent | sin | 23 | NA |
| 82 | 19.40 | humidity | 80 | 30 | > th | dose independent | rect. | 5 | 18 |
| 83 | 19.40 | temperature | 10 | 10 | > th | dose dependent | sin | 23 | NA |
| 84 | 19.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 129 | 19.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 134 | 19.61 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 23 |
| 140 | 19.66 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 19 |
| 148 | 19.67 | radiation | 20 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 160 | 19.71 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 164 | 19.73 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 10 |
| 179 | 19.73 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 19 |
| 181 | 19.74 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 18 |
| 185 | 19.74 | radiation | 10 | 270 | < th | dose dependent | sin | 0 | NA |
| 187 | 19.76 | radiation | 10 | 270 | > th | dose independent | no | NA | NA |
| 283 | 19.77 | humidity | 70 | 10 | > th | dose dependent | sin | 22 | NA |
| 284 | 19.78 | radiation | 10 | 270 | > th | dose independent | sin | 1 | NA |
| 332 | 19.86 | radiation | 10 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 333 | 19.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 341 | 19.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 357 | 19.92 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 14 |
| 371 | 19.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 11 |
| 423 | 20.03 | radiation | 20 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 437 | 20.06 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 447 | 20.08 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 451 | 20.09 | radiation | 10 | 270 | < th | dose dependent | no | NA | NA |
| 485 | 20.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 486 | 20.12 | radiation | 10 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 495 | 20.13 | radiation | 10 | 270 | < th | dose dependent | rect. | 5 | 14 |
| 542 | 20.18 | radiation | 10 | 270 | < th | dose independent | rect. | 24 | 23 |
| 552 | 20.19 | radiation | 10 | 270 | < th | dose dependent | rect. | 8 | 11 |
| 585 | 20.21 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 21 |
| 589 | 20.22 | radiation | 10 | 270 | > th | dose independent | rect. | 12 | 23 |
| 604 | 20.24 | humidity | 60 | 10 | > th | dose dependent | rect. | 11 | 12 |
| 731 | 20.32 | radiation | 20 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 804 | 20.38 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 11 |
| 812 | 20.38 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 819 | 20.39 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 842 | 20.40 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 844 | 20.40 | radiation | 20 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 845 | 20.41 | radiation | 10 | 90 | < th | dose independent | rect. | 5 | 18 |
| 847 | 20.41 | radiation | 10 | 270 | < th | dose independent | rect. | 9 | 22 |
| 861 | 20.41 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 865 | 20.42 | humidity | 80 | 30 | < th | dose independent | rect. | 7 | 11 |
| 933 | 20.45 | humidity | 60 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 980 | 20.48 | radiation | 10 | 270 | < th | dose independent | rect. | 2 | 19 |
| 997 | 20.48 | humidity | 60 | 30 | > th | dose dependent | rect. | 13 | 23 |