Os02g0740600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0740600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.34 | 0.553 | 10.5 | -0.675 | 1.57 | -0.697 | -2.62 | 0.961 | -0.0727 | 8.36 | 86.11 | 12 | -- | -- |
| 140.45 | 0.552 | 10.5 | -0.617 | 1.55 | -0.628 | -2.76 | -- | -0.0495 | 8.46 | 84.99 | 7 | -- | -- |
| 158.47 | 0.591 | 10.5 | -0.768 | 1.58 | -0.765 | -- | 1.43 | -0.0875 | 8.22 | 86.11 | 12 | -- | -- |
| 164.79 | 0.598 | 10.5 | -0.714 | 1.57 | -0.714 | -- | -- | -0.0691 | 8.13 | 85 | 4 | -- | -- |
| 292.31 | 0.801 | 10.5 | -0.78 | -- | -0.62 | -- | 1.2 | -0.0245 | -- | 82.12 | 10 | -- | -- |
| 154.99 | 0.584 | 10.4 | -0.7 | 1.52 | -- | -2.67 | -- | 0.0814 | 9.2 | -- | -- | -- | -- |
| 180.18 | 0.629 | 10.4 | -0.794 | 1.53 | -- | -- | -- | 0.0789 | 9.2 | -- | -- | -- | -- |
| 297.58 | 0.807 | 10.5 | -0.727 | -- | -0.57 | -- | -- | -0.00411 | -- | 81.66 | 4 | -- | -- |
| 177.58 | 0.621 | 10.5 | -- | 1.59 | -0.789 | -- | -- | -0.00911 | 8.05 | 85 | 2 | -- | -- |
| 316.16 | 0.831 | 10.5 | -0.8 | -- | -- | -- | -- | 0.0864 | -- | -- | -- | -- | -- |
| 196.82 | 0.656 | 10.4 | -- | 1.53 | -- | -- | -- | 0.167 | 9.24 | -- | -- | -- | -- |
| 311.38 | 0.825 | 10.5 | -- | -- | -0.616 | -- | -- | 0.0659 | -- | 82 | 2 | -- | -- |
| 333.04 | 0.852 | 10.5 | -- | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.60 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 8 |
| 2 | 125.11 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 19 |
| 7 | 127.05 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 18 | 127.25 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 18 |
| 22 | 127.73 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 13 | 17 |
| 41 | 129.15 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 23 | 7 |
| 53 | 129.25 | humidity | 90.0 | 90 | < th | dose independent | rect. | 16 | 16 |
| 58 | 129.71 | humidity | 60.0 | 30 | > th | dose independent | rect. | 12 | 18 |
| 59 | 129.74 | humidity | 90.0 | 10 | < th | dose independent | rect. | 17 | 19 |
| 60 | 129.75 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 18 |
| 77 | 130.47 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 94 | 131.15 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 95 | 131.16 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 8 |
| 101 | 131.31 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 18 |
| 105 | 131.35 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 8 |
| 108 | 131.44 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 23 | 18 |
| 112 | 131.51 | humidity | 50.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 113 | 131.52 | radiation | 1.0 | 90 | > th | dose independent | sin | 9 | NA |
| 121 | 131.78 | wind | 9.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 124 | 131.83 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 9 |
| 131 | 131.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 134 | 131.89 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 136 | 131.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 141 | 131.94 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 12 | 15 |
| 142 | 131.95 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 18 |
| 143 | 131.98 | radiation | 1.0 | 90 | < th | dose independent | sin | 8 | NA |
| 149 | 132.05 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 6 |
| 151 | 132.05 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 6 |
| 152 | 132.06 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 155 | 132.06 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 156 | 132.06 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 18 |
| 159 | 132.10 | temperature | 25.0 | 30 | > th | dose independent | rect. | 17 | 14 |
| 182 | 132.45 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 18 |
| 185 | 132.46 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 18 |
| 187 | 132.46 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 18 |
| 191 | 132.49 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 21 | 9 |
| 195 | 132.55 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 17 |
| 206 | 132.66 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 219 | 132.82 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 231 | 133.00 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 9 |
| 240 | 133.15 | temperature | 25.0 | 30 | < th | dose independent | rect. | 22 | 9 |
| 242 | 133.17 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 250 | 133.22 | radiation | 1.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 251 | 133.23 | wind | 3.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 258 | 133.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 23 |
| 260 | 133.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 267 | 133.36 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 13 | 17 |
| 269 | 133.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 16 |
| 274 | 133.41 | temperature | 25.0 | 10 | > th | dose independent | rect. | 17 | 17 |
| 275 | 133.42 | humidity | 60.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 276 | 133.42 | humidity | 80.0 | 30 | > th | dose independent | rect. | 23 | 7 |
| 288 | 133.56 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 12 | 5 |
| 294 | 133.58 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 300 | 133.64 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 23 | 7 |
| 317 | 133.73 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 17 |
| 319 | 133.74 | temperature | 15.0 | 10 | > th | dose independent | rect. | 17 | 19 |
| 320 | 133.74 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 18 |
| 323 | 133.77 | humidity | 50.0 | 30 | > th | dose independent | rect. | 12 | 5 |
| 338 | 133.87 | wind | 1.0 | 30 | > th | dose independent | rect. | 12 | 18 |
| 341 | 133.89 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 6 |
| 346 | 133.94 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 16 |
| 350 | 133.97 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 9 |
| 352 | 133.97 | humidity | 90.0 | 10 | < th | dose dependent | sin | 10 | NA |
| 358 | 134.01 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 23 | 7 |
| 362 | 134.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 7 |
| 365 | 134.05 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 7 |
| 369 | 134.05 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 24 | 7 |
| 374 | 134.05 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 24 | 7 |
| 375 | 134.05 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 24 | 7 |
| 379 | 134.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 17 |
| 405 | 134.20 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 17 |
| 406 | 134.20 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 15 |
| 409 | 134.20 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 17 |
| 435 | 134.36 | humidity | 60.0 | 270 | > th | dose independent | rect. | 9 | 7 |
| 443 | 134.41 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 7 |
| 445 | 134.41 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 7 |
| 448 | 134.41 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 7 |
| 449 | 134.41 | radiation | 20.0 | 30 | < th | dose independent | rect. | 23 | 7 |
| 452 | 134.41 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 17 |
| 454 | 134.41 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 17 |
| 455 | 134.42 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 7 |
| 462 | 134.47 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 6 | 17 |
| 463 | 134.48 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 493 | 134.62 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 12 | 5 |
| 510 | 134.73 | wind | 9.0 | 30 | < th | dose independent | rect. | 6 | 17 |
| 516 | 134.74 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 17 | 19 |
| 517 | 134.74 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 9 | 5 |
| 520 | 134.74 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 17 | 19 |
| 524 | 134.76 | wind | 3.0 | 90 | > th | dose independent | rect. | 12 | 3 |
| 542 | 134.84 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 7 |
| 552 | 134.86 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 17 | 19 |
| 564 | 134.91 | humidity | 60.0 | 270 | > th | dose independent | rect. | 22 | 17 |
| 565 | 134.92 | wind | 3.0 | 30 | > th | dose independent | rect. | 12 | 5 |
| 593 | 135.02 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 10 | 5 |
| 612 | 135.07 | temperature | 25.0 | 30 | < th | dose independent | rect. | 20 | 11 |
| 655 | 135.19 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 7 |
| 656 | 135.19 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 7 |
| 709 | 135.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 19 |
| 710 | 135.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 715 | 135.38 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 716 | 135.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 9 |
| 724 | 135.40 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 17 |
| 727 | 135.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 741 | 135.52 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 12 | 5 |
| 742 | 135.53 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 743 | 135.53 | wind | 1.0 | 90 | > th | dose dependent | rect. | 12 | 3 |
| 782 | 135.66 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 803 | 135.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 805 | 135.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 806 | 135.74 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 807 | 135.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 1 |
| 809 | 135.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 23 |
| 810 | 135.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 816 | 135.76 | radiation | 1.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 826 | 135.80 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 827 | 135.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 9 |
| 828 | 135.80 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 17 | 19 |
| 831 | 135.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 9 |
| 861 | 135.87 | temperature | 10.0 | 10 | > th | dose independent | rect. | 12 | 5 |
| 864 | 135.87 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 5 |
| 865 | 135.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 15 |
| 869 | 135.87 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 17 | 19 |
| 870 | 135.87 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 888 | 135.93 | wind | 9.0 | 30 | < th | dose independent | rect. | 17 | 19 |
| 912 | 135.97 | temperature | 25.0 | 30 | < th | dose independent | rect. | 18 | 13 |
| 916 | 135.98 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 19 |
| 919 | 135.99 | wind | 9.0 | 10 | < th | dose independent | rect. | 12 | 5 |
| 936 | 136.01 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 949 | 136.05 | temperature | 25.0 | 10 | > th | dose independent | sin | 11 | NA |
| 952 | 136.06 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 12 | 5 |
| 956 | 136.07 | temperature | 25.0 | 30 | < th | dose independent | sin | 11 | NA |
| 970 | 136.08 | radiation | 1.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 990 | 136.14 | wind | 1.0 | 270 | > th | dose dependent | rect. | 12 | 1 |