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Os02g0738900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Dynamin 2B (EC 3.6.5.5) (Dynamin-related protein 2B) (Dynamin-like protein 3).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0181) R2 : 0.353
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.603 (0.0382) R2dN8 : 0.456 R2N8 : 0.353
σ : 0.342
deviance : 53.55
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.03 0.27 12.4 0.39 0.284 -0.406 0.593 0.671 0.573 1.83 1011 3576 -- --
34.08 0.272 12.4 0.51 0.283 -0.402 0.561 -- 0.598 1.77 1010 3776 -- --
34.37 0.273 12.4 0.387 0.288 -0.401 -- 0.622 0.576 1.94 1010 3473 -- --
35.27 0.277 12.4 0.483 0.284 -0.399 -- -- 0.6 1.99 1010 3727 -- --
39.25 0.292 12.4 0.383 -- -0.432 -- 0.624 0.576 -- 1010 3490 -- --
37.88 0.289 12.4 0.593 0.299 -- 0.533 -- 0.664 1.89 -- -- -- --
38.97 0.292 12.4 0.576 0.301 -- -- -- 0.661 2.08 -- -- -- --
39.96 0.294 12.4 0.491 -- -0.441 -- -- 0.676 -- 1008 3325 -- --
35.79 0.279 12.4 -- 0.297 -0.593 -- -- 0.473 2.08 1014 47520 -- --
44.41 0.311 12.4 0.589 -- -- -- -- 0.668 -- -- -- -- --
47.71 0.323 12.4 -- 0.312 -- -- -- 0.597 2.12 -- -- -- --
40.3 0.296 12.4 -- -- -0.655 -- -- 0.484 -- 1002 40046 -- --
53.55 0.342 12.4 -- -- -- -- -- 0.603 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.89 radiation 30 14400 < th dose dependent rect. 24 5
3 30.98 wind 1 43200 > th dose independent rect. 9 2
8 31.40 radiation 1 4320 < th dose independent rect. 24 5
15 31.59 wind 1 43200 < th dose independent rect. 9 2
16 31.60 wind 1 43200 > th dose independent rect. 24 1
22 31.79 wind 1 43200 < th dose independent rect. 24 1
29 31.90 humidity 90 14400 > th dose dependent rect. 5 1
33 31.96 humidity 60 43200 < th dose dependent rect. 7 2
34 31.96 humidity 90 270 > th dose dependent rect. 24 7
55 32.09 wind 1 43200 < th dose independent rect. 23 3
57 32.10 humidity 50 43200 > th dose independent rect. 8 1
61 32.13 radiation 30 4320 < th dose independent rect. 16 16
65 32.16 humidity 50 43200 > th dose independent rect. 14 1
78 32.20 humidity 50 43200 > th dose independent rect. 20 14
79 32.22 humidity 50 43200 > th dose independent rect. 14 19
85 32.26 humidity 50 43200 < th dose independent rect. 7 3
86 32.26 radiation 40 14400 < th dose independent rect. 15 13
88 32.26 wind 1 43200 < th dose dependent rect. 24 1
90 32.27 radiation 40 14400 < th dose independent rect. 15 1
91 32.27 radiation 40 14400 < th dose independent rect. 15 3
94 32.27 radiation 10 4320 < th dose independent rect. 17 13
99 32.29 humidity 50 43200 < th dose independent rect. 8 1
116 32.31 wind 3 43200 < th dose dependent rect. 20 1
119 32.31 humidity 60 43200 < th dose dependent rect. 20 20
122 32.32 humidity 50 43200 < th dose independent rect. 20 14
134 32.34 radiation 20 43200 > th dose independent rect. 9 1
141 32.34 humidity 60 43200 < th dose dependent rect. 4 12
165 32.36 humidity 70 43200 < th dose dependent rect. 21 14
169 32.37 humidity 60 43200 < th dose dependent sin 5 NA
172 32.37 humidity 90 14400 > th dose dependent rect. 2 6
186 32.38 radiation 20 14400 > th dose independent rect. 17 14
238 32.42 wind 1 43200 > th dose independent rect. 2 1
239 32.42 radiation 20 14400 > th dose independent rect. 6 1
242 32.42 humidity 70 43200 > th dose independent rect. 6 4
244 32.42 wind 1 43200 > th dose independent rect. 21 5
246 32.42 humidity 70 43200 < th dose independent rect. 5 6
296 32.44 humidity 80 43200 < th dose independent rect. 6 1
310 32.44 radiation 20 14400 > th dose dependent rect. 17 14
336 32.46 humidity 60 43200 < th dose dependent rect. 14 1
347 32.47 humidity 50 43200 > th dose independent rect. 13 9
357 32.48 humidity 50 43200 > th dose independent sin 10 NA
360 32.48 wind 1 43200 < th dose independent rect. 21 5
368 32.48 humidity 50 43200 > th dose independent rect. 20 21
382 32.48 humidity 60 43200 < th dose dependent rect. 4 19
386 32.48 humidity 60 43200 < th dose dependent rect. 11 23
403 32.49 humidity 50 43200 > th dose independent rect. 4 13
408 32.49 humidity 50 43200 < th dose independent rect. 14 20
411 32.49 humidity 50 43200 < th dose independent rect. 14 22
412 32.49 humidity 60 43200 < th dose dependent no NA NA
413 32.49 humidity 60 43200 < th dose dependent rect. 12 3
422 32.49 humidity 60 43200 < th dose dependent rect. 5 17
448 32.50 humidity 50 43200 < th dose independent rect. 14 1
486 32.50 humidity 60 43200 > th dose dependent rect. 19 2
510 32.50 humidity 60 43200 < th dose dependent rect. 14 23
528 32.51 radiation 40 4320 < th dose independent rect. 15 18
579 32.52 radiation 20 14400 > th dose dependent rect. 6 1
580 32.52 radiation 10 43200 > th dose dependent rect. 9 1
616 32.53 humidity 50 43200 > th dose independent no NA NA
617 32.53 radiation 30 43200 < th dose independent rect. 6 1
672 32.53 humidity 50 43200 > th dose independent rect. 23 23
675 32.53 humidity 90 270 > th dose dependent rect. 3 2
698 32.54 humidity 80 43200 > th dose independent rect. 6 1
763 32.55 humidity 50 43200 > th dose independent sin 2 NA
765 32.55 radiation 10 43200 < th dose independent rect. 13 1
801 32.55 wind 1 43200 < th dose dependent rect. 11 15
806 32.56 humidity 50 43200 > th dose independent sin 0 NA
809 32.56 humidity 50 43200 < th dose independent sin 10 NA
813 32.56 wind 1 43200 > th dose independent rect. 19 7
852 32.57 humidity 50 43200 > th dose independent sin 15 NA
853 32.57 humidity 50 43200 > th dose independent sin 22 NA
856 32.57 radiation 40 43200 > th dose independent rect. 11 1
867 32.57 humidity 50 43200 < th dose independent rect. 4 14
872 32.57 humidity 50 43200 < th dose independent rect. 20 22
875 32.57 wind 3 43200 < th dose dependent rect. 11 1
892 32.58 humidity 50 43200 > th dose independent sin 20 NA
902 32.58 wind 1 43200 < th dose independent rect. 19 7
913 32.58 humidity 50 43200 < th dose independent rect. 5 12
952 32.59 radiation 40 43200 > th dose independent rect. 9 3
967 32.59 humidity 50 43200 < th dose independent rect. 7 10