Os02g0738600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CEL5=CELLULASE 5 (Fragment).
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Os02g0738600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CEL5=CELLULASE 5 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 147.86 | 0.571 | 9.86 | 0.983 | 0.848 | 1.49 | 0.472 | 3.07 | 0.6 | 8.43 | 30.84 | 96 | -- | -- |
| 158.24 | 0.586 | 9.81 | 1.48 | 0.836 | 1.68 | 0.292 | -- | 0.707 | 8.23 | 35.92 | 91 | -- | -- |
| 148.52 | 0.568 | 9.86 | 0.999 | 0.832 | 1.49 | -- | 3.04 | 0.599 | 8.39 | 30.94 | 102 | -- | -- |
| 158.45 | 0.586 | 9.81 | 1.49 | 0.846 | 1.7 | -- | -- | 0.703 | 8.3 | 47.88 | 92 | -- | -- |
| 172.86 | 0.612 | 9.88 | 1.09 | -- | 2.01 | -- | 3.22 | 0.636 | -- | 42.31 | 348 | -- | -- |
| 184.17 | 0.636 | 9.86 | 1.13 | 1.06 | -- | 1.06 | -- | 0.467 | 6.39 | -- | -- | -- | -- |
| 186.88 | 0.64 | 9.86 | 1.14 | 1.06 | -- | -- | -- | 0.464 | 6.54 | -- | -- | -- | -- |
| 179.74 | 0.624 | 9.82 | 1.61 | -- | 2.09 | -- | -- | 0.778 | -- | 42.96 | 393 | -- | -- |
| 211 | 0.677 | 9.86 | -- | 0.929 | 0.963 | -- | -- | 0.451 | 7.35 | 54.26 | 90 | -- | -- |
| 245.67 | 0.732 | 9.88 | 1.17 | -- | -- | -- | -- | 0.486 | -- | -- | -- | -- | -- |
| 221.15 | 0.696 | 9.89 | -- | 1.08 | -- | -- | -- | 0.337 | 6.48 | -- | -- | -- | -- |
| 242.81 | 0.726 | 9.87 | -- | -- | 1.55 | -- | -- | 0.536 | -- | 49.61 | 375 | -- | -- |
| 281.56 | 0.783 | 9.91 | -- | -- | -- | -- | -- | 0.357 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.19 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 146.28 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 3 | 146.31 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 4 | 146.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 5 | 146.40 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 16 | 147.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 25 | 147.53 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 29 | 147.81 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 30 | 147.82 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 32 | 147.83 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 35 | 147.96 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 36 | 147.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 39 | 148.02 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 40 | 148.02 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 41 | 148.03 | temperature | 15.0 | 10 | > th | dose dependent | no | NA | NA |
| 43 | 148.05 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 49 | 148.13 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 75 | 148.64 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 78 | 148.69 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 83 | 148.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 96 | 149.04 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 99 | 149.10 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 124 | 149.73 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 156 | 150.12 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 181 | 150.47 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 199 | 150.90 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 245 | 151.57 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 249 | 151.61 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 252 | 151.63 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 272 | 151.87 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 283 | 151.99 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 302 | 152.10 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 357 | 152.30 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 365 | 152.37 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 366 | 152.38 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 378 | 152.41 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 391 | 152.46 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 447 | 152.81 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 551 | 153.23 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 595 | 153.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 686 | 154.20 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 23 |
| 697 | 154.24 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 23 |
| 723 | 154.52 | temperature | 10.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 726 | 154.53 | temperature | 15.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 765 | 154.77 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 779 | 154.92 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 780 | 154.92 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 783 | 154.94 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 786 | 154.95 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 14 |
| 812 | 155.12 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 826 | 155.20 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 6 |
| 829 | 155.21 | temperature | 15.0 | 10 | > th | dose dependent | sin | 1 | NA |
| 835 | 155.25 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 845 | 155.30 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 18 | NA |
| 852 | 155.32 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 929 | 155.61 | temperature | 20.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 930 | 155.61 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 953 | 155.70 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 959 | 155.73 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 972 | 155.80 | temperature | 25.0 | 270 | < th | dose independent | no | NA | NA |
| 981 | 155.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 999 | 155.92 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 14 | 14 |