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Os02g0738500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Non-protein coding transcript, unclassifiable transcript.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0162) R2 : 0.11
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.255 (0.0341) R2dN8 : 0.142 R2N8 : 0.11
σ : 0.305
deviance : 42.58
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.65 0.256 10.6 0.742 0.0883 -0.422 0.348 1.13 -0.00205 8.66 22.1 1167 -- --
33.16 0.268 10.7 0.549 0.103 -0.552 0.254 -- -0.0416 8.2 21.2 2506 -- --
29.95 0.255 10.6 0.836 0.0937 -0.401 -- 1.35 0.0274 9.31 22.5 2710 -- --
32.59 0.266 10.7 0.479 0.0768 -0.55 -- -- -0.0635 7.04 21.5 1039 -- --
30.5 0.257 10.6 0.92 -- -0.407 -- 1.43 0.0561 -- 22.49 2623 -- --
40.14 0.297 10.7 0.233 0.124 -- 0.125 -- -0.229 9.61 -- -- -- --
40.19 0.297 10.7 0.238 0.123 -- -- -- -0.229 9.96 -- -- -- --
32.39 0.265 10.7 0.433 -- -0.503 -- -- -0.0871 -- 21.2 904 -- --
36.41 0.281 10.7 -- 0.0672 -0.347 -- -- -0.148 6.77 22.3 950 -- --
41.1 0.3 10.7 0.237 -- -- -- -- -0.229 -- -- -- -- --
41.69 0.302 10.7 -- 0.122 -- -- -- -0.256 9.81 -- -- -- --
36.58 0.282 10.7 -- -- -0.352 -- -- -0.149 -- 22.3 902 -- --
42.58 0.305 10.7 -- -- -- -- -- -0.255 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.67 humidity 90 43200 < th dose independent rect. 13 1
2 25.95 wind 7 43200 < th dose dependent rect. 14 1
3 26.04 humidity 90 43200 > th dose independent rect. 13 1
5 26.20 wind 1 43200 > th dose dependent rect. 14 2
9 26.32 humidity 90 43200 < th dose independent rect. 12 3
14 26.45 wind 5 43200 < th dose independent rect. 14 2
17 26.52 wind 5 43200 > th dose independent rect. 14 2
33 26.74 radiation 1 14400 > th dose independent rect. 18 11
37 26.77 atmosphere 995 43200 < th dose independent rect. 15 1
41 26.85 radiation 10 43200 > th dose independent rect. 8 1
43 26.86 atmosphere 995 43200 > th dose independent rect. 15 1
44 26.86 radiation 1 14400 > th dose independent rect. 18 1
55 26.87 humidity 80 43200 < th dose dependent rect. 19 5
60 26.93 radiation 10 43200 > th dose independent rect. 8 3
61 26.93 atmosphere 995 43200 < th dose dependent rect. 15 2
68 27.00 atmosphere 995 43200 > th dose independent rect. 14 3
73 27.01 wind 1 43200 > th dose independent rect. 8 4
74 27.01 humidity 80 43200 < th dose dependent rect. 20 1
77 27.02 wind 1 43200 < th dose dependent rect. 11 1
81 27.05 radiation 10 43200 > th dose independent rect. 10 1
89 27.07 atmosphere 995 43200 < th dose independent rect. 14 4
93 27.09 wind 3 43200 > th dose independent rect. 12 3
101 27.11 wind 3 43200 < th dose independent rect. 20 1
104 27.11 atmosphere 995 43200 > th dose independent rect. 14 6
106 27.11 wind 3 43200 > th dose independent rect. 9 8
108 27.11 wind 7 43200 < th dose dependent rect. 13 9
111 27.12 humidity 80 43200 > th dose independent rect. 20 5
122 27.17 wind 1 43200 > th dose dependent rect. 13 8
124 27.18 wind 3 43200 < th dose independent rect. 9 7
126 27.18 wind 5 43200 < th dose dependent rect. 9 8
129 27.20 humidity 80 43200 > th dose dependent rect. 13 1
132 27.21 wind 3 43200 > th dose independent rect. 9 13
151 27.25 wind 1 43200 > th dose dependent rect. 13 12
153 27.26 humidity 80 43200 < th dose independent rect. 20 4
161 27.28 wind 5 43200 < th dose dependent rect. 9 13
167 27.29 wind 5 43200 < th dose dependent rect. 11 12
177 27.32 wind 3 43200 > th dose independent rect. 20 1
234 27.40 humidity 80 43200 < th dose dependent rect. 19 17
237 27.41 radiation 1 14400 < th dose independent rect. 18 12
238 27.41 humidity 80 43200 > th dose independent rect. 20 14
246 27.42 wind 3 43200 < th dose independent rect. 9 13
251 27.43 wind 3 43200 < th dose independent rect. 11 4
254 27.43 wind 3 43200 > th dose independent rect. 11 12
255 27.43 wind 5 43200 < th dose dependent sin 20 NA
316 27.52 humidity 80 43200 < th dose independent rect. 20 15
344 27.55 wind 9 43200 > th dose dependent rect. 18 3
358 27.57 humidity 70 43200 > th dose independent rect. 19 18
388 27.59 radiation 10 43200 < th dose dependent rect. 9 1
427 27.63 wind 3 43200 > th dose independent sin 20 NA
447 27.64 humidity 80 43200 < th dose dependent sin 8 NA
487 27.69 wind 1 43200 < th dose dependent rect. 8 4
520 27.74 wind 3 43200 < th dose independent rect. 11 12
522 27.74 wind 1 43200 > th dose dependent sin 19 NA
540 27.76 wind 3 43200 > th dose independent rect. 18 4
609 27.83 wind 3 43200 < th dose independent rect. 18 4
618 27.84 wind 1 43200 < th dose independent rect. 8 4
657 27.87 wind 3 43200 < th dose independent rect. 13 10
686 27.89 temperature 20 43200 > th dose dependent rect. 12 1
690 27.90 humidity 70 43200 > th dose independent sin 8 NA
691 27.90 humidity 70 43200 < th dose independent sin 7 NA
715 27.93 wind 3 43200 < th dose independent sin 21 NA
716 27.93 radiation 10 43200 > th dose independent sin 8 NA
727 27.93 wind 1 43200 < th dose dependent rect. 8 18
792 27.98 wind 1 43200 < th dose independent rect. 4 1
833 28.01 temperature 20 43200 > th dose dependent rect. 10 3
843 28.02 temperature 20 43200 > th dose dependent rect. 10 1
879 28.05 wind 5 14400 < th dose independent rect. 5 16
888 28.06 wind 1 43200 > th dose independent rect. 24 1
962 28.11 radiation 1 43200 < th dose independent rect. 5 10