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Os02g0735700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ankyrin repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.013) R2 : 0.705
β1 : 1.1 (0.0476) R2dD : 0.36 R2D : 0.279
β2 : 0.707 (0.0328) R2dC : 0.301 R2C : 0.3
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.317 (0.0278) R2dN8 : 0.113 R2N8 : 0.0284
σ : 0.245
deviance : 27.28
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_____
C
peak time of C : 3.62
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.71 0.229 11.2 0.886 0.726 -0.369 0.117 0.714 0.22 3.78 23.82 473 -- --
24.19 0.229 11.2 0.992 0.737 -0.494 0.319 -- 0.234 3.83 22.8 368 -- --
23.73 0.227 11.2 0.888 0.733 -0.375 -- 0.717 0.222 3.74 23.8 424 -- --
24.14 0.229 11.2 0.979 0.745 -0.536 -- -- 0.248 3.67 22.71 335 -- --
49.9 0.329 11.2 0.84 -- -0.52 -- 0.632 0.18 -- 26.6 1078 -- --
27.17 0.244 11.2 1.11 0.707 -- 0.192 -- 0.318 3.63 -- -- -- --
27.28 0.245 11.2 1.1 0.707 -- -- -- 0.317 3.62 -- -- -- --
50.29 0.33 11.2 0.956 -- -0.565 -- -- 0.214 -- 25.8 1090 -- --
28.27 0.248 11.2 -- 0.7 -0.94 -- -- -0.00527 3.66 20.5 47520 -- --
55.1 0.347 11.2 1.13 -- -- -- -- 0.336 -- -- -- -- --
59.36 0.36 11.2 -- 0.729 -- -- -- 0.194 3.61 -- -- -- --
55.41 0.347 11.2 -- -- -0.97 -- -- -0.00459 -- 20.98 47520 -- --
88.95 0.44 11.2 -- -- -- -- -- 0.21 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.96 temperature 25.0 90 < th dose dependent rect. 23 14
3 22.99 humidity 80.0 43200 > th dose independent rect. 6 1
4 22.99 humidity 80.0 43200 < th dose independent rect. 6 1
7 23.09 temperature 25.0 30 < th dose dependent sin 6 NA
8 23.09 temperature 25.0 270 < th dose dependent rect. 21 15
11 23.14 temperature 15.0 10 > th dose dependent rect. 20 13
29 23.27 temperature 10.0 720 > th dose dependent rect. 19 5
63 23.39 temperature 25.0 720 < th dose dependent rect. 21 6
69 23.41 temperature 25.0 720 < th dose dependent rect. 19 9
76 23.44 humidity 80.0 43200 > th dose independent rect. 5 3
87 23.46 wind 1.0 43200 < th dose dependent rect. 4 4
100 23.48 temperature 20.0 10 > th dose dependent rect. 23 10
107 23.49 temperature 15.0 10 > th dose dependent rect. 15 18
118 23.51 temperature 15.0 720 > th dose independent rect. 19 12
133 23.54 temperature 15.0 1440 > th dose independent rect. 6 4
141 23.55 temperature 25.0 720 < th dose dependent rect. 23 2
148 23.56 temperature 10.0 720 > th dose dependent rect. 13 18
151 23.57 temperature 25.0 720 < th dose dependent sin 13 NA
185 23.65 radiation 10.0 4320 < th dose independent rect. 23 6
206 23.67 wind 1.0 43200 < th dose dependent rect. 6 1
236 23.69 temperature 10.0 270 > th dose dependent rect. 11 21
239 23.70 wind 1.0 43200 > th dose independent rect. 22 9
258 23.73 wind 1.0 43200 < th dose independent rect. 22 10
261 23.73 temperature 10.0 270 > th dose dependent rect. 17 14
277 23.75 precipitation 0.1 14400 > th dose independent rect. 7 1
280 23.75 precipitation 0.1 14400 > th dose dependent rect. 7 1
284 23.76 wind 1.0 43200 > th dose independent rect. 4 4
297 23.77 temperature 15.0 720 > th dose independent rect. 19 21
314 23.80 precipitation 0.1 14400 < th dose independent rect. 7 1
316 23.80 precipitation 0.1 14400 < th dose dependent rect. 7 1
321 23.80 radiation 40.0 270 < th dose dependent rect. 2 13
347 23.83 radiation 10.0 4320 < th dose independent rect. 19 10
361 23.84 temperature 25.0 720 < th dose dependent rect. 9 21
366 23.85 wind 1.0 43200 < th dose dependent rect. 24 2
370 23.85 wind 1.0 43200 < th dose dependent rect. 2 12
385 23.86 radiation 40.0 10 < th dose independent rect. 6 16
416 23.88 temperature 20.0 14400 < th dose independent rect. 20 1
420 23.88 wind 5.0 43200 > th dose dependent rect. 19 1
422 23.88 wind 1.0 43200 < th dose dependent rect. 4 9
436 23.89 wind 1.0 43200 > th dose independent rect. 24 2
437 23.89 wind 1.0 43200 < th dose independent rect. 4 4
455 23.90 wind 1.0 43200 < th dose independent rect. 24 2
478 23.91 temperature 15.0 270 > th dose independent rect. 11 11
479 23.91 radiation 30.0 10 < th dose independent rect. 4 12
481 23.91 wind 1.0 43200 > th dose dependent rect. 5 1
487 23.91 temperature 25.0 90 < th dose dependent rect. 8 21
515 23.93 wind 1.0 43200 < th dose dependent rect. 23 9
530 23.94 humidity 50.0 43200 > th dose independent rect. 14 1
532 23.94 radiation 1.0 10 > th dose dependent rect. 9 6
533 23.94 radiation 40.0 90 < th dose dependent rect. 5 12
542 23.95 radiation 30.0 30 < th dose independent sin 5 NA
543 23.95 wind 7.0 43200 < th dose independent rect. 19 1
548 23.95 humidity 90.0 43200 < th dose dependent rect. 6 1
550 23.95 humidity 50.0 43200 < th dose dependent rect. 13 2
555 23.95 humidity 50.0 43200 < th dose dependent rect. 5 10
582 23.96 temperature 20.0 30 > th dose independent rect. 13 20
583 23.96 temperature 20.0 270 > th dose independent rect. 11 21
584 23.96 wind 9.0 43200 > th dose dependent sin 15 NA
586 23.96 humidity 50.0 43200 < th dose dependent sin 6 NA
611 23.96 temperature 10.0 720 > th dose dependent rect. 19 21
618 23.97 radiation 20.0 90 < th dose independent rect. 5 6
643 23.98 radiation 20.0 14400 > th dose independent rect. 6 1
644 23.98 temperature 20.0 14400 > th dose independent rect. 20 2
681 23.99 temperature 10.0 720 > th dose dependent sin 14 NA
687 23.99 radiation 40.0 10 < th dose dependent rect. 6 10
722 24.00 temperature 25.0 10 > th dose independent rect. 1 8
725 24.00 radiation 30.0 270 < th dose independent rect. 11 20
747 24.01 temperature 25.0 720 < th dose dependent no NA NA
771 24.01 humidity 50.0 43200 < th dose dependent rect. 13 21
779 24.02 radiation 10.0 270 < th dose independent rect. 3 5
782 24.02 temperature 15.0 270 > th dose independent rect. 10 23
796 24.02 temperature 15.0 10 > th dose dependent rect. 17 16
798 24.02 wind 9.0 43200 > th dose dependent rect. 13 18
814 24.03 humidity 50.0 43200 < th dose independent rect. 14 1
817 24.03 radiation 30.0 4320 < th dose independent rect. 23 8
823 24.03 wind 7.0 43200 > th dose dependent rect. 17 1
833 24.03 wind 9.0 43200 < th dose dependent rect. 17 15
879 24.04 wind 5.0 43200 > th dose independent rect. 19 1
882 24.04 radiation 20.0 43200 > th dose independent rect. 9 1
888 24.04 radiation 40.0 10 < th dose independent rect. 4 18
890 24.04 humidity 50.0 43200 < th dose independent rect. 13 19
895 24.04 humidity 50.0 43200 < th dose dependent no NA NA
896 24.04 wind 7.0 43200 > th dose dependent rect. 17 4
912 24.04 wind 9.0 43200 > th dose dependent rect. 14 15
981 24.05 wind 9.0 43200 < th dose independent sin 15 NA
998 24.05 wind 9.0 43200 > th dose dependent rect. 14 13