Os02g0734900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0734900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.26 | 0.177 | 12.7 | 0.691 | 0.733 | 0.558 | -0.146 | 0.175 | 0.304 | 15.2 | 20.84 | 365 | -- | -- |
| 14.27 | 0.176 | 12.7 | 0.694 | 0.732 | 0.5 | -0.156 | -- | 0.308 | 15.2 | 20.93 | 374 | -- | -- |
| 14.32 | 0.176 | 12.7 | 0.686 | 0.734 | 0.564 | -- | 0.218 | 0.304 | 15.2 | 20.9 | 360 | -- | -- |
| 14.34 | 0.176 | 12.7 | 0.693 | 0.73 | 0.488 | -- | -- | 0.304 | 15.2 | 21 | 379 | -- | -- |
| 41.37 | 0.3 | 12.7 | 0.693 | -- | 0.735 | -- | 0.287 | 0.307 | -- | 20.89 | 921 | -- | -- |
| 16.01 | 0.188 | 12.7 | 0.598 | 0.714 | -- | -0.126 | -- | 0.262 | 15.1 | -- | -- | -- | -- |
| 16.07 | 0.188 | 12.7 | 0.595 | 0.713 | -- | -- | -- | 0.261 | 15.1 | -- | -- | -- | -- |
| 41.17 | 0.299 | 12.7 | 0.669 | -- | 0.42 | -- | -- | 0.344 | -- | 25.9 | 994 | -- | -- |
| 18.41 | 0.2 | 12.8 | -- | 0.718 | -0.43 | -- | -- | 0.0612 | 15.1 | 33.37 | 47520 | -- | -- |
| 45.13 | 0.314 | 12.7 | 0.565 | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
| 25.41 | 0.236 | 12.8 | -- | 0.702 | -- | -- | -- | 0.195 | 15.1 | -- | -- | -- | -- |
| 43.61 | 0.309 | 12.8 | -- | -- | -0.808 | -- | -- | 0.0883 | -- | 49.51 | 47520 | -- | -- |
| 53.55 | 0.342 | 12.8 | -- | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.30 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 9 |
| 5 | 13.45 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 18 |
| 15 | 13.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 10 |
| 23 | 13.83 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 15 |
| 34 | 13.92 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 17 |
| 47 | 14.01 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 1 |
| 58 | 14.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 24 | 4 |
| 80 | 14.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 17 |
| 89 | 14.13 | temperature | 20 | 270 | < th | dose dependent | rect. | 22 | 12 |
| 91 | 14.14 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 15 |
| 94 | 14.14 | temperature | 20 | 270 | < th | dose dependent | sin | 8 | NA |
| 100 | 14.15 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 11 |
| 102 | 14.16 | temperature | 20 | 720 | > th | dose independent | sin | 10 | NA |
| 127 | 14.19 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 1 |
| 141 | 14.20 | temperature | 20 | 270 | > th | dose independent | sin | 7 | NA |
| 153 | 14.21 | temperature | 20 | 270 | < th | dose independent | sin | 7 | NA |
| 164 | 14.21 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 19 |
| 219 | 14.26 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 265 | 14.29 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 4 |
| 278 | 14.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 21 |
| 308 | 14.31 | temperature | 20 | 720 | < th | dose dependent | rect. | 19 | 11 |
| 328 | 14.32 | temperature | 25 | 10 | < th | dose dependent | rect. | 4 | 9 |
| 349 | 14.33 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 361 | 14.34 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 7 |
| 375 | 14.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 2 |
| 389 | 14.35 | temperature | 20 | 30 | > th | dose independent | rect. | 19 | 18 |
| 400 | 14.35 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 10 |
| 434 | 14.36 | temperature | 20 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 452 | 14.36 | temperature | 20 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 475 | 14.37 | temperature | 20 | 720 | < th | dose dependent | sin | 12 | NA |
| 576 | 14.40 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 10 |
| 641 | 14.41 | humidity | 80 | 14400 | > th | dose dependent | sin | 10 | NA |
| 650 | 14.41 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 11 |
| 670 | 14.42 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 697 | 14.42 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 698 | 14.42 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 23 |
| 746 | 14.42 | temperature | 20 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 752 | 14.43 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 753 | 14.43 | wind | 7 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 754 | 14.43 | wind | 7 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 766 | 14.43 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 23 |
| 772 | 14.43 | temperature | 25 | 10 | < th | dose dependent | sin | 3 | NA |
| 774 | 14.43 | temperature | 20 | 270 | < th | dose dependent | no | NA | NA |
| 811 | 14.44 | wind | 7 | 4320 | > th | dose independent | rect. | 15 | 3 |
| 828 | 14.44 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 23 |
| 837 | 14.44 | temperature | 20 | 720 | < th | dose dependent | rect. | 21 | 6 |
| 886 | 14.45 | humidity | 80 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 931 | 14.46 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 969 | 14.47 | wind | 1 | 270 | > th | dose independent | rect. | 20 | 9 |
| 988 | 14.47 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 23 |