Os02g0733900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0733900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 477.13 | 1.03 | 5.6 | -4.08 | 0.711 | 3.02 | 0.354 | 1.7 | -0.82 | 15.2 | 25.89 | 257 | 22.9 | -- |
| 480.59 | 1.02 | 5.58 | -3.89 | 0.745 | 2.71 | 0.225 | -- | -0.779 | 15.1 | 26.05 | 257 | 23.3 | -- |
| 477.52 | 1.02 | 5.6 | -4.07 | 0.72 | 2.99 | -- | 1.66 | -0.818 | 15.2 | 25.92 | 257 | 22.9 | -- |
| 480.7 | 1.02 | 5.58 | -3.91 | 0.799 | 2.71 | -- | -- | -0.796 | 15.3 | 26.35 | 254 | 23.3 | -- |
| 493.14 | 1.03 | 5.61 | -4.14 | -- | 3.5 | -- | 2.74 | -0.854 | -- | 24.55 | 371 | 22.5 | -- |
| 554.76 | 1.1 | 5.65 | -4.37 | 0.831 | -- | -0.0931 | -- | -1.17 | 11.3 | -- | -- | -- | -- |
| 554.8 | 1.1 | 5.65 | -4.37 | 0.831 | -- | -- | -- | -1.17 | 11.3 | -- | -- | -- | -- |
| 500.13 | 1.04 | 5.58 | -3.91 | -- | 2.92 | -- | -- | -0.805 | -- | 25.03 | 366 | 22.9 | -- |
| 597.87 | 1.14 | 5.42 | -- | 0.565 | 3.38 | -- | -- | 0.208 | 9.39 | 46.15 | 47081 | 1.28 | -- |
| 598.03 | 1.14 | 5.67 | -4.39 | -- | -- | -- | -- | -1.18 | -- | -- | -- | -- | -- |
| 1059.05 | 1.52 | 5.54 | -- | 0.878 | -- | -- | -- | -0.684 | 11.6 | -- | -- | -- | -- |
| 606.83 | 1.15 | 5.34 | -- | -- | 3.41 | -- | -- | 0.253 | -- | 82.13 | 46931 | 2.03 | -- |
| 1107.56 | 1.55 | 5.56 | -- | -- | -- | -- | -- | -0.692 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 474.56 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 13 | 479.11 | temperature | 25 | 270 | < th | dose dependent | sin | 5 | NA |
| 29 | 481.17 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 13 |
| 69 | 485.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 7 |
| 72 | 485.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 7 |
| 74 | 485.86 | temperature | 15 | 90 | > th | dose dependent | sin | 5 | NA |
| 78 | 486.23 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 82 | 486.55 | temperature | 25 | 10 | < th | dose independent | rect. | 6 | 7 |
| 97 | 487.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 14 |
| 107 | 488.32 | temperature | 15 | 10 | > th | dose dependent | sin | 4 | NA |
| 130 | 489.18 | temperature | 25 | 90 | < th | dose independent | rect. | 6 | 6 |
| 138 | 489.67 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 16 |
| 156 | 490.45 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 6 |
| 310 | 495.98 | temperature | 25 | 10 | > th | dose independent | rect. | 8 | 8 |
| 340 | 496.71 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 9 |
| 359 | 497.55 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 5 |
| 376 | 498.10 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 441 | 500.04 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 3 |
| 444 | 500.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 468 | 500.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 7 |
| 499 | 501.21 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 1 |
| 511 | 501.50 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 3 |
| 550 | 502.23 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 14 |
| 554 | 502.26 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 12 |
| 569 | 502.52 | temperature | 25 | 10 | < th | dose independent | rect. | 6 | 12 |
| 584 | 502.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 5 |
| 670 | 504.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 13 |
| 717 | 505.30 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 6 |
| 774 | 506.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 853 | 507.32 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 13 |
| 935 | 508.19 | wind | 7 | 30 | < th | dose dependent | rect. | 20 | 20 |
| 957 | 508.37 | temperature | 25 | 10 | < th | dose independent | sin | 1 | NA |
| 958 | 508.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 1 |