Os02g0731900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Very-long-chain 3-ketoacyl-CoA synthase family protein.
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Os02g0731900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Very-long-chain 3-ketoacyl-CoA synthase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.04 | 0.605 | 6.03 | -0.643 | 2.09 | -3.6 | 0.965 | -0.635 | 0.349 | 6.17 | 26.14 | 12 | -- | -- |
| 166.26 | 0.605 | 6.04 | -0.718 | 2.09 | -3.53 | 0.885 | -- | 0.335 | 6.17 | 26.24 | 12 | -- | -- |
| 167.36 | 0.607 | 6.03 | -0.614 | 2.07 | -3.57 | -- | -0.6 | 0.356 | 6.16 | 26.1 | 4 | -- | -- |
| 167.92 | 0.604 | 6.04 | -0.707 | 2.09 | -3.54 | -- | -- | 0.333 | 6.15 | 26.18 | 4 | -- | -- |
| 358.1 | 0.886 | 6.02 | -0.508 | -- | -3.54 | -- | -0.895 | 0.594 | -- | 24.1 | 4 | -- | -- |
| 353.88 | 0.882 | 5.87 | 0.0936 | 1.9 | -- | 0.767 | -- | 1.1 | 7.88 | -- | -- | -- | -- |
| 355.59 | 0.883 | 5.87 | 0.114 | 1.9 | -- | -- | -- | 1.1 | 7.88 | -- | -- | -- | -- |
| 359.49 | 0.887 | 6.04 | -0.627 | -- | -3.46 | -- | -- | 0.57 | -- | 24.1 | 4 | -- | -- |
| 180.06 | 0.628 | 6.01 | -- | 2.04 | -3.27 | -- | -- | 0.463 | 6.29 | 26.18 | 4 | -- | -- |
| 551.9 | 1.1 | 5.91 | 0.135 | -- | -- | -- | -- | 1.12 | -- | -- | -- | -- | -- |
| 355.94 | 0.883 | 5.87 | -- | 1.9 | -- | -- | -- | 1.09 | 7.87 | -- | -- | -- | -- |
| 369.1 | 0.898 | 6.02 | -- | -- | -3.25 | -- | -- | 0.668 | -- | 24.1 | 4 | -- | -- |
| 552.38 | 1.1 | 5.92 | -- | -- | -- | -- | -- | 1.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 169.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 2 | 169.81 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 3 | 170.06 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 4 | 170.10 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 5 | 170.19 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 6 | 170.31 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 7 | 170.44 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 11 | 170.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 14 | 170.74 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 19 | 171.08 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 21 | 171.15 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 22 | 171.25 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 28 | 171.87 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 171 | 189.73 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 173 | 189.95 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 17 |
| 240 | 192.39 | temperature | 15 | 720 | > th | dose dependent | sin | 15 | NA |
| 327 | 194.68 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |
| 560 | 199.81 | temperature | 15 | 270 | > th | dose dependent | sin | 12 | NA |
| 597 | 200.72 | temperature | 15 | 10 | > th | dose dependent | sin | 11 | NA |
| 635 | 201.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 691 | 202.59 | temperature | 30 | 270 | < th | dose dependent | sin | 12 | NA |
| 742 | 203.55 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 774 | 204.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 812 | 204.57 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 889 | 205.55 | temperature | 30 | 10 | < th | dose dependent | sin | 11 | NA |
| 943 | 206.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 11 |