Os02g0730300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Potassium transporter HAK3p (Fragment).
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Os02g0730300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Potassium transporter HAK3p (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.35 | 0.411 | 12.4 | -0.589 | 1.59 | -0.314 | 0.683 | -3.11 | -0.0151 | 20.8 | 0.723 | 72 | -- | -- |
| 88.22 | 0.441 | 12.4 | -0.612 | 1.64 | -0.0867 | 2.21 | -- | -0.0332 | 21.3 | 0.723 | 72 | -- | -- |
| 77.33 | 0.41 | 12.4 | -0.601 | 1.58 | -0.356 | -- | -3.59 | -0.0138 | 20.7 | -0.0003012 | 70 | -- | -- |
| 102.57 | 0.472 | 12.4 | -0.577 | 1.72 | 0.323 | -- | -- | 0.0154 | 21.2 | 5.082 | 43604 | -- | -- |
| 177.02 | 0.623 | 12.3 | -0.597 | -- | -1.44 | -- | -3.56 | -0.0378 | -- | -49.14 | 10 | -- | -- |
| 88.34 | 0.441 | 12.4 | -0.613 | 1.68 | -- | 2.23 | -- | -0.0326 | 21.3 | -- | -- | -- | -- |
| 105.76 | 0.482 | 12.4 | -0.69 | 1.68 | -- | -- | -- | -0.0328 | 21.1 | -- | -- | -- | -- |
| 204.41 | 0.669 | 12.3 | -0.685 | -- | -1.43 | -- | -- | -0.0465 | -- | -49.14 | 10 | -- | -- |
| 107.79 | 0.484 | 12.3 | -- | 1.68 | 0.653 | -- | -- | 0.055 | 21.1 | 5.523 | 47520 | -- | -- |
| 268.75 | 0.766 | 12.3 | -0.685 | -- | -- | -- | -- | -0.042 | -- | -- | -- | -- | -- |
| 118.29 | 0.509 | 12.4 | -- | 1.68 | -- | -- | -- | 0.044 | 21.1 | -- | -- | -- | -- |
| 216.79 | 0.688 | 12.3 | -- | -- | -1.43 | -- | -- | 0.0295 | -- | -49.14 | 10 | -- | -- |
| 281.13 | 0.783 | 12.3 | -- | -- | -- | -- | -- | 0.0341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.85 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 11 | 68.55 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 34 | 70.49 | temperature | 10.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 61 | 71.53 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 63 | 71.53 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 75 | 71.96 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 76 | 72.02 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 16 |
| 80 | 72.07 | temperature | 25.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 104 | 72.36 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 127 | 72.60 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 175 | 73.13 | temperature | 25.0 | 10 | > th | dose dependent | sin | 6 | NA |
| 178 | 73.15 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 183 | 73.20 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 202 | 73.30 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 11 | 8 |
| 223 | 73.51 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 235 | 73.52 | temperature | 25.0 | 90 | > th | dose independent | sin | 5 | NA |
| 250 | 73.58 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 10 |
| 251 | 73.58 | radiation | 10.0 | 270 | < th | dose independent | rect. | 24 | 12 |
| 253 | 73.58 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 16 |
| 261 | 73.63 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 282 | 73.71 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 309 | 73.81 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 310 | 73.81 | radiation | 10.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 317 | 73.83 | radiation | 1.0 | 270 | > th | dose independent | sin | 5 | NA |
| 323 | 73.85 | radiation | 10.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 344 | 73.95 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 369 | 74.04 | radiation | 10.0 | 270 | < th | dose independent | sin | 5 | NA |
| 380 | 74.08 | radiation | 1.0 | 90 | > th | dose independent | sin | 2 | NA |
| 383 | 74.08 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 387 | 74.10 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 388 | 74.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 405 | 74.21 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 421 | 74.24 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 453 | 74.34 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 456 | 74.35 | temperature | 25.0 | 30 | < th | dose independent | sin | 4 | NA |
| 468 | 74.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 17 |
| 470 | 74.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 492 | 74.44 | temperature | 30.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 505 | 74.47 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 618 | 74.71 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 638 | 74.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 16 |
| 644 | 74.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 652 | 74.83 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 665 | 74.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 668 | 74.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 693 | 74.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 698 | 74.95 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 706 | 74.95 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 708 | 74.96 | radiation | 10.0 | 720 | < th | dose independent | rect. | 21 | 15 |
| 733 | 75.00 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 16 |
| 740 | 75.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 741 | 75.01 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 742 | 75.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 782 | 75.09 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 791 | 75.10 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 824 | 75.18 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 21 |
| 851 | 75.21 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 19 |
| 856 | 75.23 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 896 | 75.30 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 901 | 75.32 | humidity | 70.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 941 | 75.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 16 |
| 945 | 75.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 16 |
| 949 | 75.42 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 966 | 75.46 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 972 | 75.47 | humidity | 70.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 991 | 75.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 1000 | 75.51 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 8 |