Os02g0729100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os02g0729100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.41 | 0.487 | 10.2 | 1.36 | 1.06 | -1.67 | 0.472 | 1.53 | 0.0363 | 1.9 | 21.4 | 3915 | -- | -- |
| 112.94 | 0.495 | 10.2 | 1.14 | 1.01 | -1.74 | 0.841 | -- | -0.0802 | 1.74 | 21.33 | 3885 | -- | -- |
| 108.2 | 0.484 | 10.2 | 1.37 | 1.06 | -1.65 | -- | 1.6 | 0.0352 | 1.79 | 21.38 | 3897 | -- | -- |
| 109.15 | 0.487 | 10.3 | 0.975 | 1.16 | -1.89 | -- | -- | -0.109 | 1.84 | 21.4 | 2576 | -- | -- |
| 171.67 | 0.61 | 10.2 | 1.2 | -- | -1.65 | -- | 1.28 | 0.00894 | -- | 21.34 | 3057 | -- | -- |
| 192.91 | 0.651 | 10.4 | -0.0846 | 0.967 | -- | 0.637 | -- | -0.653 | 2.04 | -- | -- | -- | -- |
| 194.34 | 0.653 | 10.4 | -0.103 | 0.965 | -- | -- | -- | -0.656 | 1.86 | -- | -- | -- | -- |
| 174.01 | 0.614 | 10.2 | 1.05 | -- | -1.95 | -- | -- | -0.0975 | -- | 20.44 | 3151 | -- | -- |
| 119.41 | 0.509 | 10.3 | -- | 1.1 | -1.37 | -- | -- | -0.219 | 1.66 | 22.24 | 2351 | -- | -- |
| 250.66 | 0.74 | 10.4 | -0.0633 | -- | -- | -- | -- | -0.634 | -- | -- | -- | -- | -- |
| 194.62 | 0.653 | 10.4 | -- | 0.963 | -- | -- | -- | -0.645 | 1.86 | -- | -- | -- | -- |
| 180.55 | 0.626 | 10.3 | -- | -- | -1.32 | -- | -- | -0.244 | -- | 22.17 | 1661 | -- | -- |
| 250.77 | 0.739 | 10.4 | -- | -- | -- | -- | -- | -0.627 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.49 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 2 | 101.06 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 5 | 102.15 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 10 | 102.52 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 79 | 106.13 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 80 | 106.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 96 | 106.60 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 97 | 106.61 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 107 | 106.94 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 124 | 107.46 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 126 | 107.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 128 | 107.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 205 | 108.94 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 274 | 109.71 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 477 | 111.14 | temperature | 15 | 4320 | > th | dose dependent | sin | 14 | NA |
| 502 | 111.29 | temperature | 25 | 4320 | < th | dose dependent | sin | 15 | NA |
| 716 | 112.38 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 834 | 112.81 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 15 |
| 910 | 112.99 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 928 | 113.01 | temperature | 20 | 4320 | > th | dose dependent | sin | 19 | NA |