Os02g0728100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S49, protease IV family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0728100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase S49, protease IV family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.99 | 0.401 | 11.7 | -0.883 | 0.904 | 1.4 | -0.319 | 1.79 | -0.741 | 22.8 | 22.99 | 602 | -- | -- |
| 76.71 | 0.408 | 11.7 | -0.641 | 0.924 | 1.2 | -0.631 | -- | -0.689 | 22.7 | 23.09 | 646 | -- | -- |
| 73.35 | 0.399 | 11.7 | -0.89 | 0.913 | 1.42 | -- | 1.97 | -0.744 | 22.9 | 22.95 | 625 | -- | -- |
| 78.05 | 0.411 | 11.7 | -0.646 | 0.903 | 1.1 | -- | -- | -0.709 | 22.9 | 23.2 | 642 | -- | -- |
| 114.06 | 0.5 | 11.7 | -0.767 | -- | 1.23 | -- | 0.761 | -0.742 | -- | 22.95 | 625 | -- | -- |
| 91.84 | 0.449 | 11.7 | -0.948 | 0.791 | -- | -0.523 | -- | -0.878 | 23 | -- | -- | -- | -- |
| 92.96 | 0.452 | 11.7 | -0.928 | 0.793 | -- | -- | -- | -0.877 | 23.1 | -- | -- | -- | -- |
| 114.61 | 0.501 | 11.6 | -0.685 | -- | 1.12 | -- | -- | -0.722 | -- | 23.2 | 642 | -- | -- |
| 85.96 | 0.432 | 11.7 | -- | 0.921 | 1.38 | -- | -- | -0.611 | 23 | 22.3 | 2137 | -- | -- |
| 132.19 | 0.537 | 11.7 | -0.909 | -- | -- | -- | -- | -0.871 | -- | -- | -- | -- | -- |
| 115.67 | 0.503 | 11.7 | -- | 0.784 | -- | -- | -- | -0.774 | 23.1 | -- | -- | -- | -- |
| 125.31 | 0.521 | 11.6 | -- | -- | 1.29 | -- | -- | -0.582 | -- | 21.8 | 3112 | -- | -- |
| 154 | 0.579 | 11.7 | -- | -- | -- | -- | -- | -0.77 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.08 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 5 | 64.70 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 9 | 65.03 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 20 | 65.41 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 65 | 66.38 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 6 |
| 67 | 66.40 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 80 | 66.62 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 113 | 67.08 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 124 | 67.23 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 172 | 67.76 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 173 | 67.78 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 175 | 67.81 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 181 | 67.90 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 189 | 67.95 | wind | 3.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 240 | 68.46 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 255 | 68.56 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 266 | 68.64 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 319 | 68.90 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 364 | 69.16 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 369 | 69.17 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 473 | 69.68 | wind | 1.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 534 | 69.91 | wind | 1.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 606 | 70.16 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 617 | 70.20 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 627 | 70.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 635 | 70.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 637 | 70.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 648 | 70.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 664 | 70.36 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 746 | 70.66 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 768 | 70.71 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 798 | 70.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 838 | 70.94 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 844 | 70.97 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 869 | 71.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 871 | 71.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 894 | 71.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 896 | 71.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 938 | 71.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 965 | 71.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 966 | 71.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 971 | 71.36 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 990 | 71.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 9 |