Os02g0727400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0727400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.81 | 0.265 | 3.1 | 0.298 | 0.111 | -0.357 | 0.0703 | -0.915 | -0.228 | 8.02 | 86.71 | 4975 | -- | -- |
| 32.89 | 0.267 | 3.09 | 0.168 | 0.0968 | -0.318 | -0.0546 | -- | -0.238 | 7.73 | 86.27 | 4792 | -- | -- |
| 31.71 | 0.262 | 3.1 | 0.296 | 0.108 | -0.35 | -- | -0.939 | -0.222 | 8.81 | 86 | 5157 | -- | -- |
| 32.88 | 0.267 | 3.09 | 0.158 | 0.0911 | -0.317 | -- | -- | -0.241 | 7.27 | 86 | 4686 | -- | -- |
| 32.2 | 0.264 | 3.1 | 0.289 | -- | -0.315 | -- | -0.945 | -0.198 | -- | 85.42 | 5470 | -- | -- |
| 34.44 | 0.275 | 3.05 | 0.112 | 0.0618 | -- | -0.0513 | -- | -0.0867 | 8.39 | -- | -- | -- | -- |
| 34.45 | 0.275 | 3.05 | 0.111 | 0.0618 | -- | -- | -- | -0.0867 | 8.4 | -- | -- | -- | -- |
| 33.18 | 0.268 | 3.09 | 0.162 | -- | -0.325 | -- | -- | -0.233 | -- | 86.07 | 4411 | -- | -- |
| 33.52 | 0.27 | 3.09 | -- | 0.0843 | -0.276 | -- | -- | -0.238 | 7.23 | 85.72 | 4650 | -- | -- |
| 34.66 | 0.275 | 3.05 | 0.111 | -- | -- | -- | -- | -0.0861 | -- | -- | -- | -- | -- |
| 34.77 | 0.276 | 3.05 | -- | 0.0624 | -- | -- | -- | -0.099 | 8.27 | -- | -- | -- | -- |
| 33.82 | 0.271 | 3.09 | -- | -- | -0.273 | -- | -- | -0.23 | -- | 85.58 | 4445 | -- | -- |
| 34.99 | 0.276 | 3.06 | -- | -- | -- | -- | -- | -0.0984 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.25 | humidity | 90 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 7 | 31.49 | humidity | 50 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 15 | 31.54 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 2 |
| 31 | 31.59 | humidity | 50 | 4320 | > th | dose dependent | rect. | 1 | 8 |
| 53 | 31.68 | humidity | 90 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 58 | 31.69 | humidity | 90 | 4320 | < th | dose dependent | rect. | 3 | 5 |
| 92 | 31.75 | temperature | 30 | 10 | > th | dose independent | rect. | 11 | 1 |
| 102 | 31.76 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 10 |
| 111 | 31.77 | humidity | 90 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 146 | 31.84 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 1 |
| 175 | 31.88 | humidity | 80 | 4320 | > th | dose dependent | sin | 7 | NA |
| 189 | 31.91 | humidity | 90 | 4320 | < th | dose independent | sin | 6 | NA |
| 313 | 32.04 | temperature | 30 | 10 | > th | dose dependent | sin | 7 | NA |
| 414 | 32.14 | humidity | 90 | 4320 | > th | dose independent | sin | 5 | NA |
| 544 | 32.26 | humidity | 50 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 719 | 32.35 | humidity | 90 | 4320 | < th | dose dependent | sin | 9 | NA |
| 861 | 32.43 | temperature | 30 | 30 | > th | dose independent | sin | 7 | NA |
| 891 | 32.45 | temperature | 30 | 10 | > th | dose independent | rect. | 16 | 20 |