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Os02g0726600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0245) R2 : 0.848
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.1 (0.073) R2dC : 0.376 R2C : 0.612
β3 : -1.1 (0.0593) R2dE : 0.157 R2E : 0.368
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.744 (0.0518) R2dN8 : 0.0895 R2N8 : 0.0668
σ : 0.461
deviance : 97.92
__
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C
peak time of C : 16
E
wheather : radiation
threshold : 20
memory length : 30
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
90.09 0.446 12.3 -0.539 2.09 -1.12 0.17 0.203 -0.805 16 21.09 30 -- --
90.21 0.442 12.3 -0.545 2.09 -1.12 0.0296 -- -0.801 16 21.08 27 -- --
90.15 0.442 12.3 -0.535 2.09 -1.11 -- 0.158 -0.803 15.9 21.18 30 -- --
90.21 0.442 12.3 -0.545 2.09 -1.12 -- -- -0.801 16 21.07 27 -- --
118.36 0.507 12.2 -0.663 -- -2.41 -- -0.178 -0.796 -- 5.223 309 -- --
111.28 0.495 12.2 -0.513 2.86 -- 0.181 -- -0.73 14.7 -- -- -- --
111.39 0.494 12.2 -0.508 2.86 -- -- -- -0.729 14.7 -- -- -- --
117.94 0.506 12.2 -0.636 -- -2.4 -- -- -0.831 -- 5.25 311 -- --
97.92 0.461 12.2 -- 2.1 -1.1 -- -- -0.744 16 20 30 -- --
589.04 1.13 12.2 -0.63 -- -- -- -- -0.802 -- -- -- -- --
118.2 0.509 12.2 -- 2.87 -- -- -- -0.673 14.7 -- -- -- --
128.34 0.528 12.2 -- -- -2.42 -- -- -0.76 -- 6.069 311 -- --
599.51 1.14 12.2 -- -- -- -- -- -0.732 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.65 temperature 20.0 90 > th dose independent rect. 15 15
2 80.82 temperature 20.0 30 > th dose independent rect. 17 14
4 81.11 radiation 20.0 90 < th dose dependent rect. 24 23
6 81.42 radiation 20.0 10 < th dose dependent rect. 24 23
15 82.06 temperature 30.0 270 < th dose dependent rect. 21 3
16 82.09 temperature 20.0 270 > th dose independent rect. 13 16
17 82.22 radiation 10.0 90 < th dose independent rect. 24 23
19 82.41 temperature 20.0 30 > th dose independent rect. 13 18
21 82.56 radiation 10.0 270 < th dose dependent rect. 24 19
26 82.65 radiation 20.0 10 < th dose dependent rect. 2 21
39 83.17 temperature 30.0 90 < th dose dependent rect. 23 2
45 83.58 radiation 10.0 270 < th dose dependent rect. 24 15
47 83.60 temperature 30.0 90 < th dose dependent rect. 21 6
52 83.71 temperature 20.0 270 > th dose independent rect. 11 19
58 83.89 temperature 30.0 10 < th dose dependent rect. 23 3
64 84.03 humidity 70.0 30 > th dose dependent rect. 24 23
66 84.12 radiation 10.0 10 < th dose independent rect. 2 21
82 84.37 temperature 20.0 30 > th dose independent rect. 20 11
117 85.02 radiation 10.0 270 < th dose independent rect. 24 19
142 85.37 radiation 20.0 90 < th dose dependent rect. 2 13
146 85.42 atmosphere 1000.0 270 > th dose independent rect. 24 6
165 85.70 radiation 10.0 90 < th dose dependent sin 2 NA
170 85.77 temperature 20.0 270 > th dose independent rect. 24 6
202 86.15 radiation 10.0 270 < th dose independent rect. 24 15
205 86.16 atmosphere 1000.0 270 > th dose independent rect. 1 4
213 86.22 radiation 10.0 90 < th dose independent rect. 2 12
228 86.31 radiation 10.0 90 < th dose independent rect. 2 15
230 86.33 precipitation 0.1 270 < th dose independent rect. 5 20
231 86.33 precipitation 0.1 270 < th dose dependent rect. 5 20
247 86.47 precipitation 0.1 270 < th dose independent rect. 6 18
250 86.47 precipitation 0.1 270 < th dose dependent rect. 6 18
260 86.54 radiation 10.0 270 < th dose independent rect. 24 11
267 86.58 temperature 30.0 10 < th dose dependent rect. 19 8
271 86.61 radiation 20.0 10 < th dose dependent rect. 2 12
278 86.65 radiation 10.0 10 < th dose independent rect. 2 12
338 86.91 radiation 10.0 90 < th dose independent rect. 2 9
343 86.93 temperature 10.0 270 > th dose dependent rect. 24 6
366 87.03 precipitation 0.1 270 < th dose independent rect. 4 22
368 87.03 precipitation 0.1 270 < th dose dependent rect. 4 22
384 87.10 humidity 70.0 90 > th dose dependent rect. 1 6
433 87.37 temperature 20.0 90 < th dose independent rect. 21 6
475 87.53 humidity 80.0 10 > th dose independent rect. 2 21
479 87.55 atmosphere 995.0 270 > th dose independent rect. 24 21
511 87.74 wind 9.0 270 < th dose independent rect. 6 18
514 87.77 radiation 10.0 270 < th dose independent rect. 24 6
524 87.81 temperature 20.0 270 < th dose independent rect. 23 1
527 87.81 wind 9.0 270 < th dose independent rect. 5 20
534 87.84 atmosphere 1000.0 30 > th dose independent rect. 24 23
539 87.85 temperature 10.0 270 > th dose dependent rect. 1 4
543 87.88 atmosphere 1010.0 270 < th dose independent rect. 15 14
573 88.00 radiation 30.0 270 < th dose independent rect. 13 16
620 88.18 atmosphere 1010.0 270 < th dose independent rect. 24 6
626 88.21 atmosphere 1010.0 270 < th dose independent rect. 13 16
627 88.22 temperature 20.0 10 > th dose independent rect. 1 6
640 88.26 radiation 10.0 10 < th dose independent rect. 2 8
646 88.28 radiation 40.0 90 < th dose dependent rect. 13 18
661 88.32 temperature 30.0 270 < th dose independent rect. 24 6
662 88.32 humidity 50.0 270 > th dose independent rect. 24 6
669 88.32 temperature 10.0 270 > th dose independent rect. 6 18
672 88.33 wind 9.0 270 < th dose independent rect. 24 6
693 88.39 radiation 1.0 270 < th dose independent rect. 1 4
697 88.39 radiation 10.0 270 < th dose dependent rect. 1 4
703 88.40 temperature 20.0 10 < th dose independent rect. 22 6
706 88.40 temperature 15.0 720 > th dose dependent rect. 18 5
711 88.41 atmosphere 1000.0 10 > th dose independent rect. 2 21
729 88.46 temperature 10.0 270 > th dose independent rect. 1 4
731 88.46 temperature 30.0 270 < th dose independent rect. 1 4
732 88.46 humidity 50.0 270 > th dose independent rect. 1 4
736 88.46 atmosphere 1010.0 270 < th dose independent rect. 1 4
741 88.46 temperature 10.0 270 > th dose independent rect. 5 20
742 88.47 wind 9.0 270 < th dose independent rect. 1 4
766 88.53 atmosphere 1015.0 270 < th dose independent rect. 24 21
767 88.54 atmosphere 995.0 10 > th dose dependent rect. 23 3
768 88.55 temperature 20.0 10 < th dose independent rect. 22 4
783 88.58 atmosphere 995.0 90 > th dose dependent rect. 23 1
838 88.75 radiation 40.0 270 < th dose dependent rect. 13 16
843 88.77 radiation 10.0 90 < th dose independent sin 3 NA
863 88.80 precipitation 0.1 270 < th dose independent rect. 24 6
866 88.80 precipitation 0.1 270 < th dose dependent rect. 24 6
951 88.98 precipitation 0.1 270 < th dose independent rect. 1 4
953 88.98 precipitation 0.1 270 < th dose dependent rect. 1 4
988 89.08 temperature 20.0 30 > th dose independent sin 11 NA
990 89.09 temperature 20.0 10 < th dose independent rect. 20 8