Os02g0725300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cellulose synthase family protein.
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Os02g0725300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cellulose synthase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.4 | 0.397 | 6.9 | -0.163 | 0.504 | 0.682 | -0.217 | -0.336 | 0.0918 | 2.17 | 20.6 | 509 | -- | -- |
| 71.77 | 0.395 | 6.9 | -0.0966 | 0.512 | 0.705 | -0.218 | -- | 0.107 | 2.15 | 20.5 | 501 | -- | -- |
| 71.58 | 0.394 | 6.9 | -0.158 | 0.502 | 0.683 | -- | -0.34 | 0.0927 | 2.14 | 20.56 | 513 | -- | -- |
| 71.94 | 0.395 | 6.89 | -0.0946 | 0.504 | 0.716 | -- | -- | 0.105 | 2.18 | 20.52 | 511 | -- | -- |
| 84.53 | 0.428 | 6.9 | -0.182 | -- | 0.754 | -- | -0.319 | 0.0921 | -- | 20.6 | 794 | -- | -- |
| 87.61 | 0.439 | 6.86 | 0.144 | 0.498 | -- | -0.229 | -- | 0.26 | 1.49 | -- | -- | -- | -- |
| 87.82 | 0.439 | 6.86 | 0.151 | 0.498 | -- | -- | -- | 0.261 | 1.46 | -- | -- | -- | -- |
| 84.75 | 0.429 | 6.89 | -0.134 | -- | 0.793 | -- | -- | 0.094 | -- | 20.55 | 867 | -- | -- |
| 72.14 | 0.396 | 6.89 | -- | 0.506 | 0.691 | -- | -- | 0.121 | 2.15 | 20.52 | 503 | -- | -- |
| 103.03 | 0.474 | 6.85 | 0.171 | -- | -- | -- | -- | 0.272 | -- | -- | -- | -- | -- |
| 88.43 | 0.44 | 6.86 | -- | 0.5 | -- | -- | -- | 0.244 | 1.47 | -- | -- | -- | -- |
| 85.16 | 0.43 | 6.89 | -- | -- | 0.752 | -- | -- | 0.116 | -- | 20.56 | 862 | -- | -- |
| 103.81 | 0.476 | 6.86 | -- | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.56 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 23 |
| 2 | 72.63 | temperature | 20 | 720 | > th | dose independent | rect. | 13 | 18 |
| 5 | 72.69 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 21 |
| 6 | 72.71 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 7 |
| 8 | 72.83 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 23 |
| 9 | 72.89 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 12 |
| 22 | 73.11 | temperature | 20 | 720 | > th | dose independent | sin | 13 | NA |
| 26 | 73.16 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 22 |
| 30 | 73.21 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 20 |
| 44 | 73.33 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 23 |
| 54 | 73.42 | temperature | 20 | 270 | < th | dose independent | rect. | 17 | 19 |
| 80 | 73.58 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 16 |
| 87 | 73.62 | temperature | 20 | 720 | < th | dose independent | rect. | 15 | 14 |
| 90 | 73.63 | temperature | 20 | 720 | < th | dose independent | sin | 13 | NA |
| 127 | 73.77 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 18 |
| 183 | 73.93 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 248 | 74.11 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 23 |
| 258 | 74.13 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 280 | 74.18 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 23 |
| 301 | 74.23 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 23 |
| 364 | 74.38 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 21 |
| 485 | 74.72 | temperature | 20 | 270 | < th | dose independent | sin | 9 | NA |
| 528 | 74.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 534 | 74.87 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 556 | 74.94 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 19 |
| 570 | 74.98 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 582 | 75.01 | temperature | 20 | 10 | > th | dose independent | sin | 7 | NA |
| 587 | 75.01 | temperature | 20 | 10 | > th | dose independent | rect. | 13 | 23 |
| 594 | 75.03 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 22 |
| 646 | 75.11 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 694 | 75.18 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 713 | 75.20 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 733 | 75.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 745 | 75.23 | temperature | 20 | 10 | < th | dose independent | rect. | 7 | 23 |
| 791 | 75.28 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 23 |
| 819 | 75.31 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 820 | 75.31 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 830 | 75.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 11 |
| 878 | 75.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 897 | 75.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 905 | 75.40 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 937 | 75.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 945 | 75.46 | temperature | 20 | 10 | < th | dose independent | sin | 7 | NA |
| 965 | 75.48 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 992 | 75.51 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 1 |