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Os02g0725100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Sucraseferredoxin-like family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0111) R2 : 0.523
β1 : 0.793 (0.0406) R2dD : 0.414 R2D : 0.231
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.342 (0.0237) R2dN8 : 0.292 R2N8 : 0.11
σ : 0.208
deviance : 19.84
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.31 0.165 12.7 0.588 0.213 0.198 0.463 -0.523 0.216 10.1 25.4 89 -- --
13.16 0.169 12.6 0.733 0.202 0.186 0.388 -- 0.259 9.76 25.4 79 -- --
13.12 0.169 12.7 0.632 0.208 0.196 -- -0.422 0.226 10.2 25.5 82 -- --
13.7 0.172 12.6 0.752 0.202 0.178 -- -- 0.264 10.3 25.4 78 -- --
15.42 0.184 12.7 0.694 -- 0.213 -- -0.235 0.224 -- 25.5 54 -- --
15.18 0.183 12.6 0.788 0.261 -- 0.314 -- 0.344 12 -- -- -- --
15.58 0.185 12.6 0.802 0.26 -- -- -- 0.346 12.3 -- -- -- --
15.68 0.185 12.7 0.758 -- 0.206 -- -- 0.244 -- 25.4 78 -- --
27.8 0.246 12.7 -- 0.202 0.289 -- -- 0.147 8.26 25.79 62 -- --
19.84 0.208 12.6 0.793 -- -- -- -- 0.342 -- -- -- -- --
32.51 0.267 12.6 -- 0.249 -- -- -- 0.257 12.1 -- -- -- --
29.9 0.255 12.7 -- -- 0.267 -- -- 0.156 -- 25.72 45 -- --
36.43 0.282 12.7 -- -- -- -- -- 0.254 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.85 temperature 10.0 10 > th dose dependent rect. 5 20
4 12.07 radiation 1.0 720 < th dose dependent rect. 22 21
7 12.20 radiation 1.0 30 < th dose dependent sin 3 NA
8 12.21 radiation 1.0 30 < th dose dependent rect. 1 17
20 12.30 radiation 1.0 30 < th dose independent sin 3 NA
23 12.31 radiation 1.0 30 < th dose independent rect. 1 16
28 12.32 radiation 1.0 30 > th dose independent sin 3 NA
30 12.33 wind 1.0 43200 > th dose independent rect. 19 9
37 12.37 temperature 25.0 4320 > th dose independent rect. 10 1
43 12.38 wind 1.0 90 > th dose independent rect. 1 4
44 12.38 radiation 1.0 270 < th dose independent rect. 22 20
48 12.40 temperature 25.0 90 > th dose dependent sin 10 NA
51 12.41 temperature 25.0 90 > th dose independent rect. 5 20
56 12.43 temperature 25.0 4320 < th dose independent rect. 10 1
57 12.43 radiation 1.0 720 > th dose independent rect. 11 19
64 12.45 humidity 90.0 43200 > th dose independent rect. 20 4
65 12.45 radiation 1.0 720 > th dose independent rect. 10 21
70 12.46 humidity 90.0 43200 > th dose independent rect. 22 2
72 12.46 wind 1.0 43200 < th dose independent rect. 19 9
89 12.49 wind 1.0 43200 < th dose dependent rect. 16 12
98 12.51 precipitation 0.1 270 < th dose independent rect. 4 19
99 12.51 wind 1.0 43200 < th dose dependent sin 15 NA
105 12.51 precipitation 0.1 270 < th dose dependent rect. 4 19
114 12.53 radiation 1.0 30 < th dose independent rect. 1 13
119 12.53 radiation 1.0 30 < th dose dependent rect. 1 13
127 12.54 humidity 80.0 43200 < th dose independent rect. 14 1
132 12.54 humidity 90.0 43200 > th dose dependent rect. 22 2
142 12.55 atmosphere 1015.0 270 < th dose independent rect. 23 5
157 12.56 humidity 90.0 43200 > th dose dependent rect. 20 5
158 12.56 radiation 1.0 30 < th dose dependent rect. 1 7
160 12.56 wind 1.0 43200 < th dose dependent rect. 19 9
168 12.57 humidity 80.0 43200 > th dose independent rect. 14 1
171 12.57 radiation 1.0 30 < th dose independent rect. 1 7
183 12.57 radiation 1.0 720 < th dose dependent rect. 5 23
196 12.59 humidity 90.0 43200 < th dose independent rect. 18 7
200 12.59 wind 9.0 270 < th dose independent rect. 4 19
203 12.59 precipitation 0.1 270 < th dose independent rect. 2 23
209 12.59 precipitation 0.1 270 < th dose dependent rect. 2 23
227 12.61 wind 1.0 43200 < th dose independent rect. 20 6
232 12.61 wind 9.0 10 < th dose independent rect. 5 20
233 12.61 temperature 15.0 30 > th dose independent rect. 5 20
235 12.61 radiation 1.0 30 < th dose dependent rect. 1 5
269 12.63 radiation 1.0 43200 < th dose independent rect. 4 1
272 12.63 humidity 90.0 43200 < th dose independent rect. 20 4
295 12.64 radiation 1.0 43200 > th dose independent rect. 4 1
301 12.64 radiation 10.0 43200 < th dose independent rect. 18 3
309 12.64 radiation 1.0 30 < th dose independent rect. 1 5
321 12.64 radiation 1.0 43200 < th dose independent rect. 20 9
335 12.64 radiation 1.0 43200 > th dose dependent rect. 4 1
349 12.65 humidity 90.0 43200 < th dose independent rect. 21 1
357 12.65 wind 9.0 270 < th dose independent rect. 23 5
358 12.65 temperature 10.0 270 > th dose independent rect. 23 5
359 12.65 temperature 30.0 270 < th dose independent rect. 23 5
360 12.65 humidity 50.0 270 > th dose independent rect. 23 5
363 12.65 atmosphere 995.0 270 > th dose independent rect. 23 5
365 12.65 radiation 1.0 270 < th dose independent rect. 23 5
374 12.65 wind 1.0 43200 < th dose independent rect. 17 11
378 12.65 temperature 10.0 270 > th dose independent rect. 4 19
383 12.65 radiation 10.0 43200 > th dose dependent rect. 6 1
388 12.65 radiation 1.0 270 < th dose dependent rect. 23 5
409 12.66 radiation 10.0 43200 < th dose independent rect. 18 1
426 12.66 humidity 60.0 43200 < th dose dependent rect. 18 1
428 12.66 humidity 50.0 270 > th dose dependent rect. 22 6
434 12.67 humidity 90.0 43200 > th dose independent sin 16 NA
435 12.67 radiation 20.0 43200 < th dose independent rect. 6 2
513 12.68 radiation 20.0 43200 < th dose dependent rect. 21 10
526 12.69 temperature 15.0 43200 > th dose independent rect. 21 1
559 12.69 radiation 20.0 43200 < th dose dependent rect. 5 2
590 12.70 humidity 90.0 43200 < th dose independent sin 16 NA
591 12.70 radiation 10.0 43200 < th dose independent sin 9 NA
593 12.70 temperature 15.0 43200 > th dose independent rect. 10 1
594 12.70 temperature 25.0 4320 < th dose independent rect. 17 1
595 12.70 temperature 15.0 43200 < th dose independent rect. 21 1
601 12.70 wind 9.0 30 < th dose independent rect. 1 4
602 12.70 temperature 10.0 30 > th dose independent rect. 1 4
604 12.70 temperature 30.0 30 < th dose independent rect. 1 4
605 12.70 humidity 50.0 30 > th dose independent rect. 1 4
609 12.70 atmosphere 995.0 30 > th dose independent rect. 1 4
610 12.70 atmosphere 1010.0 30 < th dose independent rect. 1 4
638 12.70 humidity 90.0 43200 > th dose dependent sin 15 NA
644 12.70 humidity 50.0 270 > th dose dependent rect. 23 4
682 12.71 temperature 15.0 43200 < th dose independent rect. 10 1
720 12.71 temperature 25.0 90 > th dose independent rect. 16 19
780 12.72 precipitation 0.1 270 < th dose independent rect. 23 5
810 12.72 radiation 1.0 14400 < th dose dependent rect. 9 1
822 12.72 precipitation 0.1 270 < th dose dependent rect. 23 5
850 12.73 temperature 25.0 4320 > th dose independent rect. 17 1
851 12.73 temperature 20.0 4320 < th dose independent rect. 4 1
855 12.73 radiation 1.0 14400 > th dose independent rect. 8 2
914 12.73 humidity 50.0 43200 < th dose dependent rect. 16 19
917 12.74 temperature 20.0 4320 > th dose independent rect. 4 1
966 12.74 humidity 50.0 30 > th dose dependent rect. 1 4
981 12.75 radiation 40.0 43200 < th dose independent sin 10 NA
989 12.75 atmosphere 1010.0 14400 > th dose independent rect. 5 3