Os02g0722200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0722200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.39 | 0.541 | 2.82 | 0.148 | 0.2 | 0.159 | -3.55 | -2.63 | 0.047 | 12.1 | 1.818 | 36 | -- | -- |
| 136.85 | 0.549 | 2.83 | -0.00364 | 0.195 | 0.12 | -0.732 | -- | 0.0223 | 14.2 | 1.818 | 36 | -- | -- |
| 137.61 | 0.546 | 2.83 | -0.00737 | 0.23 | 0.196 | -- | 0.38 | 0.0174 | 14.5 | 32.59 | 6 | -- | -- |
| 137.92 | 0.547 | 2.83 | 0.0203 | 0.211 | 0.142 | -- | -- | 0.0457 | 14.1 | 0.1451 | 151 | -- | -- |
| 138.96 | 0.549 | 2.83 | -0.00467 | -- | 0.00866 | -- | 0.736 | 0.00969 | -- | 69.78 | 4 | -- | -- |
| 137.56 | 0.55 | 2.83 | -0.0149 | 0.0995 | -- | -0.745 | -- | 0.0178 | 15 | -- | -- | -- | -- |
| 139.03 | 0.552 | 2.84 | -0.0312 | 0.133 | -- | -- | -- | 0.0141 | 17.5 | -- | -- | -- | -- |
| 139.4 | 0.55 | 2.84 | -0.0439 | -- | -0.113 | -- | -- | 0.00826 | -- | 0.83 | 646 | -- | -- |
| 136.12 | 0.543 | 2.83 | -- | 0.637 | 0.523 | -- | -- | 0.0188 | 14.1 | 1.349 | 193 | -- | -- |
| 139.95 | 0.553 | 2.84 | -0.0356 | -- | -- | -- | -- | 0.0108 | -- | -- | -- | -- | -- |
| 139.06 | 0.552 | 2.84 | -- | 0.133 | -- | -- | -- | 0.0176 | 17.5 | -- | -- | -- | -- |
| 139.45 | 0.55 | 2.84 | -- | -- | -0.112 | -- | -- | 0.00918 | -- | 0.8301 | 644 | -- | -- |
| 139.99 | 0.552 | 2.83 | -- | -- | -- | -- | -- | 0.0148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.59 | temperature | 25.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 2 | 115.86 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 3 | 115.86 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 32 | 119.88 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 38 | 120.16 | humidity | 80.0 | 90 | > th | dose independent | rect. | 14 | 2 |
| 43 | 120.31 | humidity | 80.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 104 | 121.97 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 328 | 127.06 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 334 | 127.17 | humidity | 80.0 | 720 | < th | dose independent | rect. | 5 | 1 |
| 336 | 127.17 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 525 | 129.25 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 7 |
| 535 | 129.26 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 13 |
| 536 | 129.27 | wind | 3.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 552 | 129.36 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 570 | 129.53 | wind | 3.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 576 | 129.60 | humidity | 70.0 | 90 | > th | dose independent | rect. | 14 | 15 |
| 579 | 129.63 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 645 | 129.99 | humidity | 80.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 647 | 130.02 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 648 | 130.04 | wind | 1.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 650 | 130.06 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 657 | 130.10 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 692 | 130.19 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 712 | 130.25 | humidity | 80.0 | 720 | < th | dose independent | rect. | 22 | 16 |
| 734 | 130.33 | wind | 7.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 744 | 130.36 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 762 | 130.42 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 764 | 130.42 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 765 | 130.42 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 769 | 130.42 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 771 | 130.42 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 776 | 130.42 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 779 | 130.42 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 780 | 130.42 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 785 | 130.42 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 795 | 130.47 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 839 | 130.56 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 842 | 130.57 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 871 | 130.66 | humidity | 80.0 | 720 | < th | dose independent | sin | 7 | NA |
| 883 | 130.70 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 888 | 130.71 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 13 |
| 905 | 130.78 | wind | 1.0 | 270 | < th | dose independent | rect. | 19 | 2 |
| 929 | 130.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 932 | 130.84 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 936 | 130.84 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 942 | 130.84 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 944 | 130.84 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 964 | 130.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 969 | 130.86 | humidity | 70.0 | 270 | > th | dose independent | rect. | 12 | 17 |