Os02g0721000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0721000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 310.14 | 0.827 | 3.75 | -0.279 | 0.777 | 1.97 | 1.87 | -6.46 | -0.0455 | 5.24 | 30.53 | 1815 | -- | -- |
| 310.59 | 0.821 | 3.67 | 0.582 | 0.855 | 1.24 | 2.06 | -- | -0.167 | 5.2 | 28.1 | 1846 | -- | -- |
| 318.26 | 0.831 | 3.75 | -0.258 | 0.792 | 1.94 | -- | -6.27 | -0.0526 | 4.75 | 30.59 | 1792 | -- | -- |
| 318.38 | 0.831 | 3.69 | 0.538 | 0.851 | 1.2 | -- | -- | -0.195 | 4.74 | 27.89 | 1794 | -- | -- |
| 345.45 | 0.866 | 3.75 | -0.251 | -- | 1.73 | -- | -5 | 0.0147 | -- | 29.76 | 2672 | -- | -- |
| 355.17 | 0.884 | 3.69 | 0.846 | 0.78 | -- | 1.71 | -- | -0.234 | 4.8 | -- | -- | -- | -- |
| 362.21 | 0.891 | 3.7 | 0.838 | 0.791 | -- | -- | -- | -0.243 | 4.35 | -- | -- | -- | -- |
| 343.47 | 0.863 | 3.71 | 0.501 | -- | 1.11 | -- | -- | -0.231 | -- | 26.9 | 2685 | -- | -- |
| 325.24 | 0.84 | 3.71 | -- | 0.892 | 1.3 | -- | -- | -0.32 | 4.8 | 26.9 | 1817 | -- | -- |
| 395.89 | 0.93 | 3.71 | 0.869 | -- | -- | -- | -- | -0.222 | -- | -- | -- | -- | -- |
| 380.7 | 0.913 | 3.72 | -- | 0.807 | -- | -- | -- | -0.336 | 4.32 | -- | -- | -- | -- |
| 349.62 | 0.871 | 3.73 | -- | -- | 1.22 | -- | -- | -0.323 | -- | 26.1 | 2698 | -- | -- |
| 415.81 | 0.952 | 3.73 | -- | -- | -- | -- | -- | -0.318 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 298.73 | temperature | 30.0 | 90 | < th | dose independent | rect. | 10 | 17 |
| 3 | 300.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 10 |
| 6 | 302.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 10 | 303.04 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 29 | 305.39 | humidity | 60.0 | 90 | < th | dose independent | rect. | 12 | 7 |
| 62 | 306.08 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 10 | 16 |
| 78 | 306.85 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 13 | 13 |
| 96 | 307.48 | humidity | 60.0 | 90 | > th | dose independent | rect. | 10 | 17 |
| 98 | 307.79 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 119 | 308.08 | wind | 5.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 120 | 308.19 | humidity | 60.0 | 90 | < th | dose independent | sin | 14 | NA |
| 128 | 308.48 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 19 |
| 129 | 308.48 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 10 | 16 |
| 132 | 308.55 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 14 | 17 |
| 147 | 308.97 | temperature | 25.0 | 10 | > th | dose dependent | sin | 13 | NA |
| 155 | 309.06 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 7 |
| 156 | 309.07 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 182 | 309.67 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 226 | 310.14 | humidity | 60.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 227 | 310.15 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 7 |
| 229 | 310.19 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 235 | 310.34 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 274 | 310.82 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 276 | 310.85 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 277 | 310.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 17 |
| 281 | 310.91 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 287 | 310.96 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 8 |
| 295 | 311.04 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 307 | 311.11 | radiation | 10.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 308 | 311.13 | humidity | 60.0 | 270 | > th | dose independent | rect. | 7 | 16 |
| 314 | 311.21 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 322 | 311.28 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 354 | 311.65 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 367 | 311.86 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 372 | 311.90 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 13 | 20 |
| 381 | 311.94 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 440 | 312.21 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 18 | 17 |
| 461 | 312.25 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 13 | 3 |
| 508 | 312.51 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 535 | 312.58 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 17 | 18 |
| 538 | 312.60 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 9 | NA |
| 543 | 312.60 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 17 | 21 |
| 544 | 312.61 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 567 | 312.66 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 11 | 17 |
| 568 | 312.67 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 584 | 312.75 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 596 | 312.82 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 624 | 312.86 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 17 | 12 |
| 625 | 312.86 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 628 | 312.87 | temperature | 30.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 635 | 312.88 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 643 | 312.91 | temperature | 25.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 663 | 312.95 | humidity | 60.0 | 90 | > th | dose independent | rect. | 3 | 7 |
| 665 | 312.95 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 23 |
| 670 | 312.99 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 16 | 2 |
| 691 | 313.01 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 696 | 313.01 | wind | 7.0 | 90 | < th | dose independent | rect. | 3 | 7 |
| 712 | 313.03 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 720 | 313.05 | temperature | 30.0 | 1440 | > th | dose dependent | no | NA | NA |
| 723 | 313.05 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 817 | 313.06 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 881 | 313.20 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 917 | 313.23 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 6 |
| 918 | 313.23 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 926 | 313.25 | temperature | 30.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 973 | 313.35 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 994 | 313.37 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 997 | 313.37 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 998 | 313.37 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 6 |