Os02g0720900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A1, pepsin family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0720900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase A1, pepsin family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.61 | 0.65 | 12.2 | -2.22 | 0.452 | 1.94 | 2.28 | -5.42 | 0.0113 | 5.49 | 21.79 | 1158 | 10.3 | -- |
| 211.96 | 0.678 | 12 | -0.865 | 0.404 | 1.65 | 1.5 | -- | 0.302 | 5.61 | 20.69 | 1086 | 9.05 | -- |
| 203.73 | 0.665 | 12.1 | -2.1 | 0.469 | 1.93 | -- | -4.87 | 0.0209 | 5.32 | 22.15 | 1174 | 10.3 | -- |
| 218.06 | 0.688 | 12 | -0.816 | 0.43 | 1.6 | -- | -- | 0.37 | 5.24 | 21 | 1113 | 9.76 | -- |
| 210.53 | 0.676 | 12.1 | -1.99 | -- | 2.17 | -- | -4.69 | -0.00249 | -- | 21.54 | 1051 | 8.45 | -- |
| 275.8 | 0.779 | 11.9 | -0.359 | 0.91 | -- | 1.77 | -- | 0.675 | 4.72 | -- | -- | -- | -- |
| 283.34 | 0.788 | 11.9 | -0.369 | 0.92 | -- | -- | -- | 0.666 | 4.3 | -- | -- | -- | -- |
| 218.65 | 0.689 | 12 | -0.929 | -- | 2.34 | -- | -- | 0.34 | -- | 13.09 | 1119 | 10.1 | -- |
| 233.77 | 0.712 | 12 | -- | 0.456 | 1.4 | -- | -- | 0.484 | 4.87 | 21.5 | 1104 | 9.41 | -- |
| 328.99 | 0.848 | 11.9 | -0.332 | -- | -- | -- | -- | 0.69 | -- | -- | -- | -- | -- |
| 286.92 | 0.792 | 11.9 | -- | 0.913 | -- | -- | -- | 0.707 | 4.31 | -- | -- | -- | -- |
| 238.68 | 0.72 | 12 | -- | -- | 1.97 | -- | -- | 0.495 | -- | 11.38 | 1091 | 9.93 | -- |
| 331.9 | 0.85 | 11.9 | -- | -- | -- | -- | -- | 0.727 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 196.15 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 19 |
| 5 | 200.20 | radiation | 40 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 7 | 200.34 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 13 | 201.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 14 | 201.17 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 20 | 201.62 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 23 | 201.64 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 9 |
| 32 | 201.99 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 42 | 202.25 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 46 | 202.26 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 50 | 202.29 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 59 | 202.42 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 60 | 202.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 8 |
| 91 | 202.77 | wind | 5 | 43200 | > th | dose dependent | sin | 18 | NA |
| 96 | 202.82 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 12 |
| 99 | 202.86 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 113 | 202.99 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 163 | 203.47 | wind | 5 | 43200 | > th | dose independent | sin | 19 | NA |
| 169 | 203.52 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 189 | 203.66 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 17 |
| 205 | 203.73 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 230 | 203.95 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 274 | 204.27 | wind | 5 | 43200 | < th | dose independent | sin | 19 | NA |
| 289 | 204.33 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 314 | 204.54 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 15 |
| 354 | 204.73 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 383 | 204.85 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 401 | 204.98 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 402 | 204.98 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 414 | 205.03 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 432 | 205.07 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 506 | 205.36 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 611 | 205.70 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 735 | 205.98 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 743 | 206.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 755 | 206.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 758 | 206.04 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 914 | 206.42 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 931 | 206.44 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 949 | 206.49 | radiation | 20 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 969 | 206.55 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 975 | 206.57 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |