Os02g0720200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 65kD microtubule associated protein.
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Os02g0720200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 65kD microtubule associated protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.54 | 0.561 | 7.21 | -2.64 | 0.387 | -1.72 | 1.69 | 0.127 | -0.696 | 7.8 | 72 | 1265 | -- | -- |
| 142.45 | 0.556 | 7.21 | -2.63 | 0.409 | -1.72 | 1.69 | -- | -0.689 | 7.91 | 72.23 | 1250 | -- | -- |
| 150.64 | 0.572 | 7.22 | -2.63 | 0.403 | -1.72 | -- | 0.31 | -0.703 | 7.81 | 72.45 | 1253 | -- | -- |
| 150.83 | 0.572 | 7.21 | -2.58 | 0.397 | -1.7 | -- | -- | -0.691 | 7.77 | 72.72 | 1256 | -- | -- |
| 157.73 | 0.585 | 7.23 | -2.61 | -- | -1.7 | -- | 0.242 | -0.699 | -- | 72.96 | 1306 | -- | -- |
| 246.21 | 0.736 | 7.16 | -2.26 | 0.468 | -- | 1.49 | -- | -0.462 | 5.81 | -- | -- | -- | -- |
| 250.5 | 0.741 | 7.17 | -2.25 | 0.494 | -- | -- | -- | -0.47 | 4.76 | -- | -- | -- | -- |
| 157.66 | 0.585 | 7.22 | -2.55 | -- | -1.71 | -- | -- | -0.698 | -- | 73.31 | 1305 | -- | -- |
| 315.66 | 0.827 | 7.15 | -- | 0.344 | -1.51 | -- | -- | -0.393 | 7.51 | 75 | 1302 | -- | -- |
| 263.41 | 0.758 | 7.17 | -2.23 | -- | -- | -- | -- | -0.457 | -- | -- | -- | -- | -- |
| 383.98 | 0.917 | 7.11 | -- | 0.453 | -- | -- | -- | -0.219 | 4.9 | -- | -- | -- | -- |
| 321.18 | 0.835 | 7.15 | -- | -- | -1.5 | -- | -- | -0.388 | -- | 74.78 | 1323 | -- | -- |
| 394.81 | 0.927 | 7.11 | -- | -- | -- | -- | -- | -0.209 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.05 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 8 | 148.44 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 12 | 148.96 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 13 | 149.07 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 30 | 149.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 44 | 150.18 | humidity | 50 | 1440 | > th | dose dependent | sin | 23 | NA |
| 55 | 150.33 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 69 | 150.63 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 16 |
| 108 | 151.05 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 124 | 151.25 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 163 | 151.54 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 171 | 151.62 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 190 | 151.78 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 209 | 152.07 | humidity | 90 | 1440 | < th | dose dependent | sin | 0 | NA |
| 212 | 152.09 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 320 | 153.20 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 359 | 153.44 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 403 | 153.82 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 432 | 154.12 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 435 | 154.13 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 449 | 154.26 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 458 | 154.31 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 510 | 154.66 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 652 | 155.63 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 669 | 155.70 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 674 | 155.74 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 710 | 155.82 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 730 | 155.86 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 834 | 156.30 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 870 | 156.49 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 876 | 156.52 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 879 | 156.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 12 |