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Os02g0720000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0166) R2 : 0.344
β1 : 0.899 (0.0609) R2dD : 0.325 R2D : 0.24
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.261 (0.0355) R2dN8 : 0.104 R2N8 : 0.019
σ : 0.312
deviance : 44.66
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.49 0.218 11.4 1.09 0.564 -0.185 -0.493 -1.68 0.299 1.82 22.25 1819 -- --
22.7 0.224 11.4 0.932 0.517 0.383 -0.487 -- 0.288 1.88 22.25 1819 -- --
22.41 0.221 11.4 1.11 0.565 -0.17 -- -1.69 0.304 1.8 22.27 1749 -- --
23.62 0.228 11.4 0.948 0.515 0.388 -- -- 0.291 1.84 22.27 1749 -- --
38.01 0.289 11.4 1.07 -- 0.655 -- -0.469 0.347 -- 22.27 1749 -- --
24.27 0.231 11.4 0.861 0.566 -- -0.498 -- 0.246 1.79 -- -- -- --
25.24 0.235 11.4 0.876 0.565 -- -- -- 0.248 1.76 -- -- -- --
35.06 0.277 11.4 1.05 -- 0.682 -- -- 0.396 -- 28.71 48 -- --
30.06 0.255 11.5 -- 0.555 -0.632 -- -- -0.0379 1.79 35.65 47520 -- --
44.66 0.312 11.4 0.899 -- -- -- -- 0.261 -- -- -- -- --
45.49 0.315 11.4 -- 0.581 -- -- -- 0.151 1.81 -- -- -- --
48.72 0.325 11.5 -- -- -0.668 -- -- -0.0387 -- 48.67 47520 -- --
66 0.379 11.4 -- -- -- -- -- 0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.70 wind 7.0 4320 > th dose dependent rect. 7 3
2 20.82 wind 1.0 14400 > th dose independent rect. 2 1
4 20.93 wind 7.0 4320 > th dose independent rect. 7 3
5 21.02 wind 7.0 4320 < th dose independent rect. 7 3
6 21.04 temperature 20.0 4320 < th dose dependent rect. 20 3
7 21.06 wind 1.0 14400 < th dose independent rect. 2 2
8 21.07 temperature 20.0 4320 < th dose dependent rect. 21 1
22 21.24 humidity 90.0 14400 < th dose independent rect. 5 1
29 21.27 temperature 20.0 4320 < th dose independent rect. 6 16
33 21.29 humidity 90.0 14400 < th dose independent rect. 2 5
43 21.31 temperature 20.0 4320 > th dose independent rect. 6 16
51 21.32 temperature 20.0 4320 < th dose dependent rect. 6 16
56 21.34 temperature 20.0 4320 < th dose dependent rect. 7 1
57 21.35 temperature 15.0 14400 > th dose independent rect. 20 1
62 21.36 temperature 20.0 14400 < th dose dependent rect. 10 1
70 21.37 temperature 20.0 14400 < th dose independent rect. 9 9
75 21.38 temperature 20.0 14400 < th dose independent rect. 17 1
76 21.38 temperature 20.0 14400 > th dose independent rect. 10 5
85 21.39 temperature 20.0 14400 < th dose independent rect. 9 1
87 21.39 temperature 20.0 14400 < th dose independent rect. 9 5
107 21.40 temperature 20.0 4320 < th dose dependent sin 20 NA
114 21.41 temperature 20.0 14400 > th dose independent rect. 10 1
119 21.41 wind 1.0 14400 < th dose dependent rect. 2 2
132 21.42 humidity 90.0 14400 < th dose independent rect. 23 8
148 21.43 temperature 20.0 14400 < th dose dependent rect. 17 1
151 21.44 temperature 20.0 4320 < th dose independent sin 21 NA
160 21.45 temperature 20.0 4320 < th dose independent rect. 17 6
178 21.46 temperature 20.0 14400 < th dose dependent rect. 7 11
181 21.47 temperature 15.0 14400 > th dose independent rect. 5 4
196 21.48 temperature 15.0 14400 > th dose independent rect. 6 1
207 21.49 temperature 20.0 4320 > th dose independent sin 21 NA
211 21.49 radiation 1.0 4320 < th dose independent rect. 18 3
212 21.49 temperature 20.0 4320 < th dose independent rect. 17 4
220 21.49 temperature 20.0 14400 < th dose dependent rect. 10 8
232 21.50 radiation 1.0 4320 < th dose independent rect. 18 7
253 21.51 wind 7.0 1440 > th dose independent rect. 2 6
270 21.52 humidity 60.0 43200 > th dose independent rect. 9 1
333 21.55 humidity 60.0 43200 < th dose independent rect. 9 1
336 21.55 radiation 1.0 4320 > th dose independent rect. 17 2
356 21.55 wind 5.0 14400 > th dose dependent rect. 22 7
361 21.55 temperature 10.0 10 > th dose dependent rect. 5 23
411 21.57 wind 1.0 43200 < th dose dependent rect. 9 7
414 21.57 wind 1.0 43200 < th dose dependent rect. 8 14
421 21.58 temperature 20.0 14400 > th dose independent rect. 17 1
427 21.58 temperature 20.0 1440 > th dose independent rect. 6 7
449 21.59 temperature 15.0 14400 < th dose independent rect. 4 1
450 21.59 temperature 15.0 14400 < th dose independent rect. 20 1
481 21.60 humidity 50.0 43200 < th dose independent rect. 13 5
498 21.60 temperature 25.0 1440 < th dose dependent rect. 4 9
518 21.61 temperature 20.0 1440 < th dose independent rect. 5 8
519 21.61 humidity 50.0 43200 < th dose independent rect. 13 8
528 21.61 wind 7.0 14400 > th dose independent rect. 22 11
547 21.62 temperature 15.0 14400 < th dose independent rect. 4 5
548 21.62 temperature 20.0 4320 > th dose independent rect. 17 6
608 21.63 wind 7.0 14400 < th dose independent rect. 22 9
612 21.63 wind 7.0 14400 < th dose independent rect. 22 11
630 21.63 wind 7.0 1440 > th dose dependent rect. 1 7
634 21.64 humidity 50.0 43200 < th dose independent sin 17 NA
654 21.64 wind 7.0 14400 > th dose independent rect. 21 9
677 21.64 wind 3.0 43200 < th dose dependent rect. 11 3
686 21.64 temperature 15.0 90 > th dose dependent rect. 5 21
702 21.65 humidity 50.0 43200 > th dose independent rect. 12 6
703 21.65 wind 5.0 14400 > th dose independent rect. 22 7
705 21.65 wind 7.0 14400 < th dose independent rect. 22 7
738 21.66 humidity 50.0 43200 < th dose independent rect. 15 1
791 21.66 temperature 25.0 1440 < th dose dependent sin 3 NA
836 21.67 humidity 50.0 43200 < th dose independent rect. 6 12
876 21.67 humidity 90.0 14400 > th dose dependent rect. 10 2
895 21.68 humidity 50.0 43200 > th dose independent sin 19 NA
898 21.68 precipitation 0.1 43200 < th dose independent rect. 23 1
904 21.68 temperature 20.0 4320 > th dose independent rect. 17 4
979 21.68 precipitation 0.1 43200 < th dose dependent rect. 23 1
989 21.68 temperature 25.0 10 < th dose dependent rect. 10 22
997 21.69 humidity 50.0 43200 < th dose independent no NA NA