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Os02g0718100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.25 (0.0627) R2 : 0.442
β1 : 2.67 (0.231) R2dD : 0.172 R2D : 0.0268
β2 : 0.547 (0.157) R2dC : 0.0159 R2C : 0.00585
β3 : -1.57 (0.139) R2dE : 0.174 R2E : 0.153
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.34 (0.134) R2dN8 : 0.16 R2N8 : 0.105
σ : 1.17
deviance : 631.07
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C
peak time of C : 13.7
E
wheather : humidity
threshold : 69
memory length : 1016
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 17
open length of G : 0.3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
624.93 1.17 9.26 2.69 0.53 -1.65 -2.05 -0.692 1.3 14.3 69.22 1006 17 0.851
620.85 1.16 9.26 2.75 0.565 -1.6 -1.8 -- 1.31 14.1 69.07 1014 17 0.417
631.6 1.17 9.25 2.75 0.537 -1.6 -- 0.349 1.35 13.8 69.1 1013 17 0.333
631.07 1.17 9.25 2.67 0.547 -1.57 -- -- 1.34 13.7 69 1016 17 0.3
647.06 1.18 9.25 2.71 -- -1.69 -- 0.136 1.36 -- 69 1013 17 0.3
798.84 1.33 9.2 2.38 1.05 -- -1.47 -- 1.51 14.4 -- -- -- --
806.62 1.33 9.21 2.34 1.05 -- -- -- 1.5 14.4 -- -- -- --
647.03 1.18 9.25 2.66 -- -1.71 -- -- 1.33 -- 69 1013 17 0.299
819.96 1.33 9.25 -- 0.576 -1.33 -- -- 1.29 14.1 69.58 1013 17 0.283
871.47 1.38 9.21 2.29 -- -- -- -- 1.47 -- -- -- -- --
950.5 1.44 9.26 -- 1 -- -- -- 1.24 14.3 -- -- -- --
838.52 1.35 9.25 -- -- -1.36 -- -- 1.28 -- 69 1013 17 0.283
1010.08 1.48 9.27 -- -- -- -- -- 1.22 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 655.16 temperature 20 270 > th dose dependent rect. 15 19
2 655.97 temperature 15 270 > th dose dependent rect. 14 21
7 660.84 temperature 20 90 > th dose dependent rect. 17 18
14 662.16 temperature 20 1440 > th dose dependent rect. 17 1
24 664.67 temperature 20 10 > th dose dependent rect. 16 20
28 665.86 temperature 30 1440 > th dose dependent rect. 15 1
31 666.42 humidity 70 720 < th dose independent rect. 17 2
36 667.42 temperature 20 30 > th dose dependent rect. 4 18
73 670.00 temperature 15 30 > th dose dependent rect. 4 16
92 670.61 temperature 15 90 > th dose dependent rect. 3 22
94 670.74 humidity 70 1440 < th dose dependent rect. 16 1
122 672.44 humidity 60 720 > th dose independent rect. 15 8
173 673.87 temperature 25 10 > th dose dependent sin 10 NA
187 674.42 humidity 70 720 > th dose independent rect. 17 6
194 674.72 humidity 60 1440 > th dose independent rect. 15 3
200 674.84 humidity 70 720 < th dose independent rect. 17 15
206 674.93 temperature 30 1440 > th dose dependent sin 13 NA
210 675.04 humidity 60 1440 < th dose dependent rect. 13 5
235 675.36 humidity 60 1440 < th dose independent rect. 14 5
280 675.72 temperature 30 720 > th dose dependent rect. 17 17
282 675.77 humidity 60 1440 > th dose independent rect. 15 16
285 675.80 humidity 60 1440 > th dose independent rect. 15 14
328 676.08 humidity 60 1440 < th dose dependent sin 13 NA
472 677.97 humidity 60 1440 < th dose independent sin 13 NA
521 678.32 temperature 20 1440 > th dose dependent sin 19 NA
543 678.96 humidity 60 1440 > th dose independent sin 13 NA
569 679.36 temperature 10 720 > th dose dependent rect. 22 21
665 680.45 temperature 30 720 > th dose independent rect. 17 17
679 680.65 temperature 30 1440 < th dose dependent rect. 17 1
744 681.45 temperature 20 10 > th dose dependent rect. 13 23
759 681.67 temperature 20 720 > th dose dependent rect. 22 21
905 682.86 humidity 70 720 > th dose independent rect. 17 14
988 683.58 temperature 30 30 < th dose dependent rect. 5 23