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Os02g0718000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.015) R2 : 0.00835
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0617 (0.0315) R2dN8 : 0.0108 R2N8 : 0.00835
σ : 0.282
deviance : 36.45
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.39 0.222 10.6 0.48 0.0691 -0.86 -0.455 -0.409 0.0859 0.44 18.6 1070 -- --
22.45 0.221 10.6 0.47 0.0651 -0.717 -0.446 -- 0.0793 0.204 18.67 1043 -- --
23.05 0.224 10.6 0.497 0.0839 -0.681 -- 0.0597 0.0894 2.9 18.61 985 -- --
23.05 0.224 10.6 0.489 0.0882 -0.711 -- -- 0.086 2.87 18.6 993 -- --
23.49 0.226 10.6 0.484 -- -0.75 -- -0.00726 0.0845 -- 18.7 990 -- --
25.04 0.235 10.6 0.588 0.11 -- -0.462 -- 0.125 1.07 -- -- -- --
25.84 0.238 10.6 0.603 0.119 -- -- -- 0.126 2.36 -- -- -- --
23.49 0.226 10.6 0.484 -- -0.744 -- -- 0.085 -- 18.7 989 -- --
26.55 0.24 10.6 -- 0.0995 -0.883 -- -- -0.00649 2.35 19.12 6801 -- --
26.69 0.241 10.6 0.608 -- -- -- -- 0.129 -- -- -- -- --
35.43 0.278 10.6 -- 0.131 -- -- -- 0.0591 2.44 -- -- -- --
27.23 0.243 10.6 -- -- -0.904 -- -- -0.0117 -- 19.09 6808 -- --
36.45 0.282 10.6 -- -- -- -- -- 0.0617 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.29 temperature 15.0 30 > th dose dependent rect. 5 11
5 21.52 atmosphere 1010.0 30 < th dose independent rect. 5 11
6 21.64 temperature 15.0 720 > th dose independent rect. 18 22
12 21.84 temperature 15.0 720 > th dose independent rect. 6 23
14 21.85 atmosphere 1010.0 30 < th dose independent rect. 19 21
18 21.87 temperature 10.0 43200 > th dose independent rect. 17 3
19 21.89 temperature 15.0 30 > th dose dependent rect. 19 21
22 21.93 atmosphere 1015.0 4320 < th dose independent rect. 17 2
23 21.94 temperature 10.0 270 > th dose dependent rect. 3 11
26 21.97 temperature 15.0 720 > th dose independent rect. 11 19
36 22.14 humidity 80.0 43200 < th dose dependent rect. 4 1
42 22.16 temperature 15.0 720 > th dose independent rect. 9 22
52 22.20 temperature 15.0 720 > th dose independent rect. 19 11
54 22.21 atmosphere 1010.0 720 < th dose independent rect. 4 2
61 22.23 temperature 15.0 720 > th dose independent rect. 18 13
63 22.24 radiation 20.0 4320 < th dose independent rect. 18 12
64 22.24 temperature 15.0 720 > th dose independent rect. 21 22
66 22.25 temperature 15.0 4320 > th dose independent rect. 17 2
71 22.26 temperature 15.0 720 > th dose independent rect. 1 15
77 22.29 temperature 20.0 30 > th dose independent rect. 5 11
79 22.30 humidity 70.0 720 < th dose independent rect. 17 1
85 22.34 temperature 15.0 720 > th dose independent rect. 23 19
88 22.34 temperature 10.0 720 > th dose dependent rect. 4 2
90 22.35 humidity 60.0 720 > th dose independent rect. 17 6
92 22.35 atmosphere 1010.0 270 < th dose independent rect. 17 21
94 22.35 humidity 70.0 720 < th dose dependent rect. 16 18
115 22.41 temperature 10.0 43200 > th dose independent rect. 9 11
122 22.43 humidity 60.0 720 < th dose independent rect. 16 18
132 22.45 radiation 30.0 4320 < th dose independent rect. 17 14
134 22.45 precipitation 0.1 14400 > th dose dependent rect. 19 1
137 22.46 humidity 60.0 720 < th dose independent sin 11 NA
139 22.46 temperature 15.0 1440 > th dose independent rect. 9 11
141 22.46 humidity 60.0 720 < th dose dependent sin 11 NA
142 22.46 humidity 70.0 720 < th dose dependent rect. 17 1
148 22.47 temperature 15.0 1440 > th dose independent rect. 6 11
156 22.48 humidity 70.0 720 < th dose dependent rect. 16 3
158 22.49 precipitation 0.1 14400 > th dose independent rect. 19 1
168 22.50 atmosphere 1010.0 30 < th dose independent rect. 19 23
182 22.51 atmosphere 1015.0 30 < th dose dependent rect. 5 11
188 22.52 temperature 20.0 720 < th dose dependent rect. 5 13
191 22.53 precipitation 0.1 14400 < th dose independent rect. 19 1
193 22.53 atmosphere 1010.0 30 < th dose independent rect. 5 22
194 22.53 precipitation 0.1 14400 < th dose dependent rect. 19 1
214 22.54 temperature 30.0 720 < th dose independent rect. 18 5
223 22.55 wind 7.0 30 < th dose independent rect. 5 11
231 22.56 temperature 15.0 720 > th dose independent rect. 13 15
246 22.58 atmosphere 1015.0 4320 > th dose independent rect. 13 6
257 22.59 atmosphere 1015.0 4320 > th dose independent rect. 14 4
266 22.59 temperature 20.0 720 < th dose dependent sin 0 NA
293 22.61 humidity 80.0 43200 < th dose independent rect. 4 1
302 22.61 temperature 15.0 90 > th dose independent rect. 19 21
311 22.62 humidity 60.0 720 < th dose independent rect. 16 3
320 22.62 humidity 80.0 43200 < th dose dependent rect. 23 1
322 22.62 atmosphere 1015.0 4320 > th dose dependent rect. 13 5
342 22.63 temperature 25.0 10 > th dose dependent rect. 22 18
344 22.64 temperature 15.0 720 > th dose independent rect. 3 3
361 22.64 temperature 15.0 720 > th dose independent rect. 2 21
374 22.64 atmosphere 995.0 30 > th dose dependent rect. 2 17
391 22.66 temperature 15.0 720 > th dose independent rect. 2 5
427 22.67 temperature 15.0 270 > th dose independent rect. 3 11
430 22.67 humidity 50.0 720 > th dose independent rect. 11 19
443 22.68 humidity 70.0 720 > th dose independent rect. 18 3
476 22.70 humidity 50.0 14400 > th dose independent rect. 18 2
482 22.70 temperature 15.0 720 < th dose independent rect. 4 11
486 22.70 wind 7.0 30 < th dose independent rect. 16 13
511 22.72 atmosphere 1015.0 4320 > th dose independent rect. 16 1
513 22.72 atmosphere 1015.0 4320 < th dose independent rect. 14 1
533 22.72 atmosphere 1010.0 30 < th dose independent rect. 5 19
540 22.72 atmosphere 1015.0 4320 > th dose dependent rect. 16 1
554 22.73 humidity 50.0 14400 > th dose independent rect. 18 12
556 22.73 temperature 30.0 720 < th dose independent rect. 17 14
561 22.73 temperature 20.0 720 < th dose dependent rect. 8 7
575 22.74 humidity 50.0 720 > th dose independent rect. 9 15
596 22.75 temperature 15.0 720 < th dose independent rect. 3 15
602 22.75 atmosphere 1015.0 720 < th dose dependent rect. 5 1
614 22.76 atmosphere 1015.0 4320 > th dose independent rect. 14 1
619 22.76 atmosphere 1010.0 720 < th dose independent rect. 19 12
644 22.77 temperature 15.0 720 > th dose independent rect. 9 15
646 22.77 temperature 15.0 720 > th dose independent rect. 21 15
649 22.77 humidity 50.0 720 > th dose independent rect. 1 23
664 22.78 temperature 15.0 720 > th dose independent rect. 9 7
693 22.79 wind 7.0 720 < th dose independent rect. 16 2
710 22.80 humidity 80.0 43200 > th dose independent rect. 5 1
724 22.80 humidity 50.0 720 > th dose independent rect. 18 23
726 22.80 wind 1.0 43200 < th dose dependent rect. 9 4
733 22.81 temperature 15.0 1440 > th dose independent rect. 6 1
742 22.81 temperature 15.0 720 > th dose independent rect. 4 9
756 22.81 temperature 30.0 90 < th dose dependent rect. 9 8
769 22.81 radiation 1.0 720 < th dose dependent rect. 6 17
783 22.82 radiation 30.0 90 < th dose independent rect. 15 14
792 22.82 wind 9.0 43200 > th dose dependent rect. 9 5
823 22.83 wind 9.0 43200 > th dose dependent rect. 9 10
832 22.84 wind 9.0 43200 < th dose independent rect. 17 1
836 22.84 humidity 90.0 720 < th dose independent rect. 9 6
851 22.84 wind 9.0 43200 > th dose dependent rect. 9 7
859 22.85 temperature 15.0 1440 > th dose independent rect. 6 3
873 22.85 temperature 15.0 720 < th dose independent rect. 2 18
876 22.85 temperature 15.0 90 > th dose independent rect. 4 23
909 22.86 humidity 50.0 43200 > th dose independent rect. 3 2
913 22.86 temperature 30.0 720 < th dose independent rect. 18 3
921 22.86 humidity 80.0 43200 < th dose independent rect. 21 9
924 22.86 wind 7.0 270 < th dose independent rect. 14 13
929 22.86 atmosphere 1010.0 270 < th dose independent rect. 4 19
933 22.86 wind 9.0 43200 > th dose dependent sin 23 NA
959 22.87 precipitation 0.1 720 < th dose independent sin 1 NA
968 22.87 humidity 50.0 720 > th dose independent rect. 12 9
972 22.87 atmosphere 1010.0 270 < th dose independent rect. 9 13
982 22.87 humidity 80.0 43200 < th dose independent rect. 23 18
991 22.87 precipitation 0.1 720 < th dose dependent sin 1 NA
992 22.87 wind 1.0 43200 < th dose dependent rect. 12 1