Os02g0714500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
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Os02g0714500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.77 | 0.198 | 9.87 | 0.579 | 0.291 | -0.406 | -0.475 | -0.392 | 0.228 | 3.16 | 80 | 1412 | -- | -- |
| 17.9 | 0.197 | 9.87 | 0.611 | 0.288 | -0.428 | -0.478 | -- | 0.235 | 3.18 | 79.59 | 1414 | -- | -- |
| 18.32 | 0.199 | 9.87 | 0.574 | 0.334 | -0.385 | -- | -0.572 | 0.23 | 2.64 | 80 | 1219 | -- | -- |
| 18.62 | 0.201 | 9.87 | 0.638 | 0.277 | -0.422 | -- | -- | 0.243 | 3.09 | 79 | 1422 | -- | -- |
| 19.81 | 0.207 | 9.87 | 0.653 | -- | -0.231 | -- | 0.201 | 0.225 | -- | 77.98 | 130 | -- | -- |
| 20.09 | 0.21 | 9.88 | 0.597 | 0.277 | -- | -0.531 | -- | 0.21 | 3.11 | -- | -- | -- | -- |
| 21.02 | 0.215 | 9.87 | 0.608 | 0.274 | -- | -- | -- | 0.213 | 3.02 | -- | -- | -- | -- |
| 19.96 | 0.208 | 9.88 | 0.627 | -- | -0.235 | -- | -- | 0.213 | -- | 77.53 | 129 | -- | -- |
| 28.73 | 0.25 | 9.88 | -- | 0.222 | -0.443 | -- | -- | 0.176 | 2.69 | 79 | 1699 | -- | -- |
| 25.33 | 0.235 | 9.87 | 0.62 | -- | -- | -- | -- | 0.22 | -- | -- | -- | -- | -- |
| 30.76 | 0.259 | 9.89 | -- | 0.286 | -- | -- | -- | 0.145 | 3.03 | -- | -- | -- | -- |
| 29.98 | 0.255 | 9.89 | -- | -- | -0.242 | -- | -- | 0.153 | -- | 80.01 | 205 | -- | -- |
| 35.46 | 0.278 | 9.89 | -- | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.29 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 5 | 18 |
| 10 | 17.57 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 14 | 17.60 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 21 |
| 18 | 17.65 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 29 | 17.70 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 35 | 17.73 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 15 |
| 41 | 17.74 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 47 | 17.75 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 51 | 17.75 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 55 | 17.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 56 | 17.76 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 59 | 17.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 77 | 17.77 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 78 | 17.78 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 86 | 17.78 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 101 | 17.79 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 106 | 17.80 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 107 | 17.80 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 118 | 17.81 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 20 |
| 127 | 17.81 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 128 | 17.81 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 134 | 17.82 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 135 | 17.82 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 153 | 17.82 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 158 | 17.83 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 176 | 17.83 | humidity | 90.0 | 720 | > th | dose dependent | sin | 22 | NA |
| 177 | 17.83 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 204 | 17.85 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 205 | 17.85 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 223 | 17.85 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 2 |
| 242 | 17.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 245 | 17.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 250 | 17.87 | humidity | 80.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 266 | 17.87 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 281 | 17.88 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 303 | 17.89 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 334 | 17.91 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 20 |
| 360 | 17.93 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 377 | 17.94 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 378 | 17.94 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 383 | 17.94 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 18 |
| 386 | 17.94 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 409 | 17.95 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 20 |
| 413 | 17.95 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 447 | 17.97 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 450 | 17.97 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 451 | 17.97 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 7 |
| 454 | 17.97 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 459 | 17.97 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 463 | 17.97 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 15 | 15 |
| 477 | 17.97 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 17 | 21 |
| 497 | 17.98 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 535 | 17.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 599 | 18.00 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 624 | 18.00 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 625 | 18.00 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 637 | 18.01 | humidity | 70.0 | 1440 | > th | dose dependent | no | NA | NA |
| 639 | 18.01 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 664 | 18.01 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 767 | 18.05 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 780 | 18.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 806 | 18.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 814 | 18.06 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 19 |
| 844 | 18.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 861 | 18.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 890 | 18.07 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 900 | 18.07 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 22 |
| 908 | 18.08 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 921 | 18.08 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 939 | 18.08 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 15 | 17 |