Os02g0712600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Concanavalin A-like lectin/glucanase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0712600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Concanavalin A-like lectin/glucanase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 300.82 | 0.815 | 3.28 | -0.492 | 0.516 | 1.94 | 0.147 | -14.2 | -0.0393 | 1.28 | 4.838 | 515 | 21.2 | 0.932 |
| 349.1 | 0.87 | 3.23 | -0.493 | 0.592 | 3.95 | -0.345 | -- | -0.0719 | 0.814 | 5.399 | 635 | 20.8 | 1.09 |
| 299.69 | 0.806 | 3.28 | -0.489 | 0.516 | 1.98 | -- | -14.2 | -0.0424 | 1.39 | 4.82 | 511 | 21.2 | 0.933 |
| 347.06 | 0.868 | 3.28 | -0.42 | 0.562 | 4.2 | -- | -- | -0.0606 | 0.666 | 5.38 | 627 | 20.8 | 1.1 |
| 312.57 | 0.823 | 3.27 | -0.49 | -- | 2.46 | -- | -13.5 | -0.00882 | -- | 4.9 | 511 | 21.2 | 0.874 |
| 456.02 | 1 | 3.38 | -0.829 | 0.9 | -- | -2.13 | -- | -0.311 | 1.76 | -- | -- | -- | -- |
| 473.62 | 1.02 | 3.38 | -0.76 | 0.897 | -- | -- | -- | -0.297 | 1.45 | -- | -- | -- | -- |
| 358.88 | 0.882 | 3.28 | -0.314 | -- | 4.71 | -- | -- | -0.0259 | -- | 5.34 | 621 | 20.8 | 1.13 |
| 349.62 | 0.871 | 3.29 | -- | 0.522 | 4.5 | -- | -- | -0.00312 | 1.05 | 5.372 | 621 | 20.8 | 1.13 |
| 523.04 | 1.07 | 3.37 | -0.724 | -- | -- | -- | -- | -0.278 | -- | -- | -- | -- | -- |
| 488.83 | 1.03 | 3.36 | -- | 0.884 | -- | -- | -- | -0.213 | 1.42 | -- | -- | -- | -- |
| 361.62 | 0.886 | 3.3 | -- | -- | 4.82 | -- | -- | -0.00771 | -- | 5.369 | 621 | 20.8 | 1.15 |
| 536.88 | 1.08 | 3.35 | -- | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 334.45 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 2 | 349.79 | wind | 7.0 | 720 | > th | dose independent | rect. | 16 | 11 |
| 5 | 350.47 | wind | 3.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 6 | 350.51 | wind | 7.0 | 720 | > th | dose independent | rect. | 16 | 8 |
| 23 | 354.25 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 24 | 354.49 | wind | 5.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 49 | 357.56 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 16 |
| 52 | 357.76 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 55 | 358.25 | temperature | 20.0 | 30 | > th | dose independent | rect. | 21 | 7 |
| 59 | 358.86 | wind | 7.0 | 720 | > th | dose independent | sin | 13 | NA |
| 66 | 360.01 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 10 |
| 73 | 361.24 | wind | 7.0 | 720 | < th | dose independent | sin | 13 | NA |
| 77 | 362.10 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 83 | 362.96 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 99 | 363.79 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 118 | 364.66 | wind | 7.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 121 | 364.80 | wind | 5.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 124 | 364.88 | wind | 5.0 | 270 | > th | dose independent | rect. | 20 | 8 |
| 125 | 364.91 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 128 | 365.03 | wind | 5.0 | 30 | > th | dose independent | rect. | 21 | 9 |
| 150 | 366.20 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 155 | 366.44 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 158 | 366.50 | temperature | 20.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 160 | 366.54 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 275 | 370.75 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 299 | 371.66 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 359 | 373.25 | wind | 5.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 426 | 375.26 | wind | 5.0 | 270 | > th | dose dependent | rect. | 20 | 9 |
| 448 | 375.58 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 452 | 375.83 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 2 |
| 457 | 375.85 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 460 | 375.94 | radiation | 10.0 | 720 | < th | dose independent | rect. | 16 | 1 |
| 479 | 376.31 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 506 | 377.05 | temperature | 20.0 | 90 | > th | dose independent | sin | 11 | NA |
| 526 | 377.47 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 557 | 377.91 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 568 | 378.08 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 577 | 378.13 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 579 | 378.16 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 3 |
| 653 | 378.55 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 12 |
| 659 | 378.60 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 661 | 378.61 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 721 | 379.53 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 728 | 379.59 | temperature | 20.0 | 90 | < th | dose independent | sin | 11 | NA |
| 809 | 380.51 | temperature | 20.0 | 30 | > th | dose independent | rect. | 14 | 14 |
| 835 | 380.61 | wind | 3.0 | 10 | > th | dose dependent | rect. | 21 | 10 |
| 838 | 380.66 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 842 | 380.70 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 843 | 380.71 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 882 | 381.17 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 902 | 381.30 | radiation | 20.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 908 | 381.38 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 917 | 381.44 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 922 | 381.47 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 923 | 381.47 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 951 | 381.63 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 14 |
| 976 | 381.77 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 982 | 381.80 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 12 |
| 983 | 381.81 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 1 |