Os02g0712400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AP2 domain containing protein RAP2.9 (Fragment).
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Os02g0712400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AP2 domain containing protein RAP2.9 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.32 | 0.313 | 9.46 | 0.704 | 0.78 | -0.627 | 0.225 | -1.05 | 0.337 | 4.23 | 82.11 | 1482 | -- | -- |
| 46 | 0.316 | 9.46 | 0.8 | 0.792 | -0.697 | 0.273 | -- | 0.326 | 4.2 | 81 | 1455 | -- | -- |
| 44.43 | 0.31 | 9.46 | 0.694 | 0.768 | -0.613 | -- | -1.07 | 0.337 | 4.24 | 82.78 | 1508 | -- | -- |
| 46.04 | 0.316 | 9.45 | 0.795 | 0.785 | -0.707 | -- | -- | 0.355 | 4.23 | 81.99 | 1447 | -- | -- |
| 66.8 | 0.381 | 9.46 | 0.748 | -- | -0.915 | -- | -0.697 | 0.374 | -- | 85.55 | 1857 | -- | -- |
| 58.89 | 0.36 | 9.44 | 0.689 | 0.762 | -- | 0.0837 | -- | 0.377 | 4.25 | -- | -- | -- | -- |
| 58.91 | 0.359 | 9.44 | 0.689 | 0.762 | -- | -- | -- | 0.377 | 4.25 | -- | -- | -- | -- |
| 58.68 | 0.357 | 9.45 | 0.725 | -- | -1.09 | -- | -- | 0.408 | -- | 131.5 | 304 | -- | -- |
| 61.74 | 0.366 | 9.45 | -- | 0.818 | -0.724 | -- | -- | 0.34 | 4.05 | 110.5 | 2700 | -- | -- |
| 90.28 | 0.444 | 9.45 | 0.719 | -- | -- | -- | -- | 0.397 | -- | -- | -- | -- | -- |
| 71.41 | 0.395 | 9.46 | -- | 0.775 | -- | -- | -- | 0.3 | 4.23 | -- | -- | -- | -- |
| 72.53 | 0.397 | 9.46 | -- | -- | -1.08 | -- | -- | 0.328 | -- | 158.9 | 303 | -- | -- |
| 103.92 | 0.476 | 9.47 | -- | -- | -- | -- | -- | 0.317 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 2 | 40.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 7 | 41.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 8 | 41.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 10 | 41.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 13 | 41.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 9 |
| 14 | 41.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 11 |
| 16 | 41.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 13 |
| 43 | 42.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 8 |
| 46 | 42.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 48 | 42.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 14 |
| 52 | 42.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 12 |
| 54 | 42.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 56 | 42.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 60 | 42.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 61 | 42.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 10 |
| 64 | 42.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 16 |
| 65 | 42.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 73 | 42.44 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 20 | NA |
| 87 | 42.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 89 | 42.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 95 | 42.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 153 | 42.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 155 | 42.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 158 | 42.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 169 | 42.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 14 |
| 171 | 42.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 14 |
| 172 | 42.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 319 | 43.22 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 21 | NA |
| 320 | 43.22 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 21 | NA |
| 322 | 43.22 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 21 | NA |
| 352 | 43.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 386 | 43.44 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 420 | 43.54 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 424 | 43.55 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 425 | 43.55 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 438 | 43.57 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 566 | 43.82 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 621 | 43.93 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 633 | 43.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 650 | 43.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 658 | 44.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 673 | 44.04 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 9 | 13 |
| 678 | 44.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 680 | 44.05 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 681 | 44.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 725 | 44.12 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 755 | 44.17 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 805 | 44.25 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 18 | NA |
| 825 | 44.28 | humidity | 70.0 | 1440 | > th | dose independent | sin | 15 | NA |
| 833 | 44.28 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 22 |
| 846 | 44.31 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 852 | 44.32 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 858 | 44.32 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 926 | 44.42 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 939 | 44.43 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 956 | 44.44 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 957 | 44.44 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |