Os02g0710900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein Hsp70 family protein.
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Os02g0710900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heat shock protein Hsp70 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.74 | 0.331 | 12.5 | 0.545 | 0.112 | -0.562 | -0.148 | -2.59 | 0.27 | 21.3 | 9.97 | 4316 | -- | -- |
| 51.94 | 0.336 | 12.4 | 0.416 | 0.114 | -0.409 | -0.0329 | -- | 0.276 | 21.2 | 20.02 | 11571 | -- | -- |
| 49.73 | 0.328 | 12.5 | 0.543 | 0.112 | -0.565 | -- | -2.57 | 0.269 | 21.3 | 9.46 | 4359 | -- | -- |
| 51.89 | 0.335 | 12.4 | 0.395 | 0.105 | -0.396 | -- | -- | 0.267 | 21.7 | 20.01 | 11529 | -- | -- |
| 50.47 | 0.331 | 12.5 | 0.545 | -- | -0.563 | -- | -2.62 | 0.271 | -- | 9.46 | 4296 | -- | -- |
| 58.45 | 0.358 | 12.4 | 0.411 | 0.126 | -- | -0.0879 | -- | 0.368 | 21.9 | -- | -- | -- | -- |
| 58.48 | 0.358 | 12.4 | 0.414 | 0.126 | -- | -- | -- | 0.368 | 21.9 | -- | -- | -- | -- |
| 52.62 | 0.338 | 12.4 | 0.372 | -- | -0.392 | -- | -- | 0.261 | -- | 20.01 | 11500 | -- | -- |
| 55.67 | 0.347 | 12.5 | -- | 0.109 | -0.436 | -- | -- | 0.212 | 21.8 | 20.04 | 11663 | -- | -- |
| 59.43 | 0.36 | 12.4 | 0.416 | -- | -- | -- | -- | 0.368 | -- | -- | -- | -- | -- |
| 63.01 | 0.371 | 12.4 | -- | 0.128 | -- | -- | -- | 0.322 | 22.2 | -- | -- | -- | -- |
| 56.19 | 0.349 | 12.5 | -- | -- | -0.437 | -- | -- | 0.194 | -- | 20 | 12319 | -- | -- |
| 64 | 0.373 | 12.4 | -- | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.57 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 44.70 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 4 | 45.47 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 5 | 45.47 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 14 | 46.22 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 2 | 7 |
| 29 | 46.73 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 12 |
| 30 | 46.74 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 37 | 46.84 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 12 |
| 39 | 46.87 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 53 | 46.97 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 3 | 3 |
| 55 | 46.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 56 | 46.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 57 | 46.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 65 | 47.04 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 77 | 47.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 81 | 47.11 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 2 |
| 88 | 47.14 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 99 | 47.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 8 |
| 102 | 47.16 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 109 | 47.16 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 127 | 47.20 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 130 | 47.21 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 14 |
| 136 | 47.24 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 151 | 47.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 8 |
| 170 | 47.29 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 172 | 47.29 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 187 | 47.30 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 20 | 12 |
| 222 | 47.35 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 257 | 47.38 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 316 | 47.41 | radiation | 1.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 323 | 47.41 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 15 |
| 354 | 47.43 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 17 |
| 363 | 47.45 | radiation | 1.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 372 | 47.46 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 399 | 47.48 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 430 | 47.51 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 454 | 47.54 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 477 | 47.57 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 538 | 47.64 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 564 | 47.67 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 637 | 47.73 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 654 | 47.74 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 712 | 47.76 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 18 |
| 717 | 47.77 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 806 | 47.84 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 818 | 47.85 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 821 | 47.85 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 883 | 47.89 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 885 | 47.89 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 899 | 47.91 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 912 | 47.91 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 955 | 47.93 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 6 |