Os02g0708600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
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Os02g0708600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, C2H2-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.29 | 0.171 | 11.7 | 0.842 | 0.406 | 0.195 | 0.189 | 1.42 | 0.192 | 13.5 | 18.7 | 2437 | -- | -- |
| 14.85 | 0.181 | 11.7 | 0.469 | 0.25 | 0.344 | -0.0157 | -- | 0.0779 | 13.2 | 20.44 | 2041 | -- | -- |
| 13.38 | 0.17 | 11.7 | 0.839 | 0.385 | 0.196 | -- | 1.42 | 0.191 | 13.4 | 18.6 | 2025 | -- | -- |
| 14.62 | 0.178 | 11.7 | 0.445 | 0.396 | 0.255 | -- | -- | 0.0869 | 13.3 | 23.5 | 2100 | -- | -- |
| 17 | 0.193 | 11.7 | 0.527 | -- | 0.561 | -- | 0.718 | 0.0676 | -- | 18.8 | 1745 | -- | -- |
| 16.64 | 0.191 | 11.7 | 0.538 | 0.375 | -- | 0.0534 | -- | 0.136 | 13.6 | -- | -- | -- | -- |
| 16.65 | 0.191 | 11.7 | 0.54 | 0.375 | -- | -- | -- | 0.136 | 13.6 | -- | -- | -- | -- |
| 17.46 | 0.195 | 11.7 | 0.397 | -- | 0.55 | -- | -- | 0.0396 | -- | 20.89 | 12 | -- | -- |
| 16.04 | 0.187 | 11.7 | -- | 0.386 | 0.431 | -- | -- | -0.0761 | 13.6 | 19 | 47520 | -- | -- |
| 25.22 | 0.235 | 11.7 | 0.525 | -- | -- | -- | -- | 0.128 | -- | -- | -- | -- | -- |
| 24.34 | 0.231 | 11.7 | -- | 0.365 | -- | -- | -- | 0.0761 | 13.6 | -- | -- | -- | -- |
| 21.68 | 0.217 | 11.7 | -- | -- | 0.692 | -- | -- | -0.0231 | -- | 18.8 | 3 | -- | -- |
| 32.49 | 0.266 | 11.7 | -- | -- | -- | -- | -- | 0.0697 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 12 | 13.05 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 2 |
| 146 | 13.26 | temperature | 25 | 4320 | < th | dose dependent | rect. | 9 | 15 |
| 221 | 13.35 | temperature | 25 | 4320 | < th | dose dependent | sin | 19 | NA |
| 274 | 13.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 20 |
| 339 | 13.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 7 |
| 368 | 13.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 401 | 13.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 20 |
| 486 | 13.48 | temperature | 15 | 4320 | > th | dose dependent | sin | 16 | NA |
| 491 | 13.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 554 | 13.49 | temperature | 20 | 1440 | > th | dose dependent | sin | 5 | NA |
| 620 | 13.50 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 621 | 13.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 691 | 13.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 697 | 13.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 699 | 13.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 755 | 13.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 765 | 13.52 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 859 | 13.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 868 | 13.53 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 882 | 13.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 5 |