Os02g0708500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0708500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 285.28 | 0.794 | 3.3 | 0.13 | 0.363 | 0.775 | 1.03 | 1.68 | -0.226 | 14.3 | 19.88 | 221 | -- | -- |
| 293.68 | 0.804 | 3.26 | 0.282 | 0.352 | 0.438 | 0.645 | -- | -0.19 | 13.5 | 20.1 | 216 | -- | -- |
| 288.85 | 0.792 | 3.29 | 0.196 | 0.352 | 0.75 | -- | 1.37 | -0.202 | 14.5 | 19.9 | 235 | -- | -- |
| 294.52 | 0.799 | 3.25 | 0.364 | 0.336 | 0.546 | -- | -- | -0.175 | 14 | 19.8 | 197 | -- | -- |
| 295.8 | 0.801 | 3.29 | 0.143 | -- | 0.638 | -- | 1.4 | -0.233 | -- | 19.9 | 298 | -- | -- |
| 301.45 | 0.814 | 3.28 | 0.167 | 0.245 | -- | 0.619 | -- | -0.27 | 13.4 | -- | -- | -- | -- |
| 302.89 | 0.815 | 3.28 | 0.189 | 0.252 | -- | -- | -- | -0.266 | 14.1 | -- | -- | -- | -- |
| 300.95 | 0.808 | 3.26 | 0.32 | -- | 0.439 | -- | -- | -0.199 | -- | 19.83 | 233 | -- | -- |
| 297.59 | 0.803 | 3.27 | -- | 0.324 | 0.437 | -- | -- | -0.214 | 14.3 | 20.2 | 205 | -- | -- |
| 306.7 | 0.818 | 3.28 | 0.178 | -- | -- | -- | -- | -0.272 | -- | -- | -- | -- | -- |
| 303.83 | 0.815 | 3.28 | -- | 0.249 | -- | -- | -- | -0.287 | 14.1 | -- | -- | -- | -- |
| 303.36 | 0.811 | 3.27 | -- | -- | 0.356 | -- | -- | -0.234 | -- | 20 | 237 | -- | -- |
| 307.54 | 0.819 | 3.28 | -- | -- | -- | -- | -- | -0.292 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 273.71 | humidity | 80 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 2 | 273.83 | humidity | 80 | 270 | < th | dose independent | rect. | 3 | 3 |
| 8 | 276.02 | temperature | 20 | 10 | > th | dose independent | sin | 23 | NA |
| 9 | 276.03 | temperature | 20 | 10 | < th | dose independent | sin | 23 | NA |
| 23 | 277.78 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 18 |
| 39 | 278.74 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 40 | 278.78 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 21 |
| 49 | 279.15 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 7 |
| 73 | 279.88 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 84 | 280.13 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 13 |
| 91 | 280.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 10 |
| 96 | 280.38 | temperature | 20 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 100 | 280.44 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 11 |
| 108 | 280.64 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 11 |
| 138 | 281.07 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 20 |
| 151 | 281.25 | temperature | 20 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 160 | 281.36 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 6 |
| 193 | 281.70 | humidity | 90 | 90 | > th | dose independent | rect. | 14 | 1 |
| 197 | 281.70 | humidity | 90 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 205 | 281.77 | wind | 5 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 214 | 281.87 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 215 | 281.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 13 |
| 218 | 281.92 | temperature | 20 | 10 | < th | dose dependent | rect. | 6 | 9 |
| 223 | 281.96 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 20 |
| 226 | 282.01 | humidity | 80 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 243 | 282.19 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 244 | 282.20 | humidity | 80 | 720 | > th | dose independent | rect. | 24 | 4 |
| 247 | 282.21 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 251 | 282.24 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 254 | 282.26 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 256 | 282.27 | humidity | 80 | 10 | < th | dose independent | rect. | 4 | 2 |
| 276 | 282.43 | wind | 3 | 10 | > th | dose independent | rect. | 1 | 6 |
| 277 | 282.43 | temperature | 20 | 90 | < th | dose dependent | sin | 23 | NA |
| 288 | 282.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 18 | 16 |
| 291 | 282.58 | radiation | 1 | 10 | < th | dose independent | rect. | 15 | 1 |
| 307 | 282.67 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 21 |
| 317 | 282.72 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 10 |
| 334 | 282.79 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 349 | 282.85 | wind | 5 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 372 | 282.96 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 22 |
| 378 | 283.06 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 23 |
| 382 | 283.08 | wind | 7 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 388 | 283.12 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 6 |
| 392 | 283.13 | temperature | 20 | 10 | > th | dose independent | rect. | 2 | 13 |
| 424 | 283.27 | temperature | 20 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 430 | 283.31 | wind | 3 | 10 | > th | dose dependent | rect. | 2 | 5 |
| 435 | 283.35 | temperature | 20 | 10 | < th | dose independent | rect. | 2 | 20 |
| 440 | 283.37 | temperature | 20 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 441 | 283.38 | temperature | 20 | 270 | < th | dose independent | rect. | 5 | 1 |
| 442 | 283.38 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 456 | 283.43 | wind | 5 | 1440 | > th | dose dependent | rect. | 19 | 15 |
| 481 | 283.54 | radiation | 10 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 522 | 283.79 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 523 | 283.80 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 525 | 283.81 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 528 | 283.82 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 535 | 283.85 | temperature | 20 | 270 | > th | dose independent | rect. | 7 | 23 |
| 547 | 283.89 | wind | 5 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 606 | 284.23 | atmosphere | 1005 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 611 | 284.26 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 646 | 284.39 | temperature | 20 | 90 | < th | dose dependent | rect. | 5 | 5 |
| 649 | 284.40 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 21 |
| 651 | 284.40 | radiation | 1 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 656 | 284.42 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 17 |
| 671 | 284.45 | temperature | 20 | 270 | < th | dose independent | sin | 7 | NA |
| 685 | 284.48 | temperature | 20 | 270 | < th | dose independent | rect. | 18 | 13 |
| 693 | 284.50 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 12 |
| 750 | 284.66 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 16 |
| 886 | 284.99 | temperature | 20 | 270 | > th | dose independent | sin | 7 | NA |
| 899 | 285.02 | atmosphere | 1005 | 43200 | < th | dose dependent | sin | 21 | NA |
| 919 | 285.05 | wind | 5 | 1440 | > th | dose dependent | rect. | 19 | 4 |
| 965 | 285.13 | wind | 5 | 10 | < th | dose independent | rect. | 16 | 1 |