Os02g0703300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1218 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0703300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1218 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.74 | 0.409 | 9.82 | 0.361 | 0.817 | 0.656 | -0.182 | -1.38 | 0.0414 | 3.53 | 21.4 | 747 | -- | -- |
| 81.81 | 0.421 | 9.78 | 0.699 | 0.818 | 0.727 | -0.155 | -- | 0.0984 | 3.28 | 21.2 | 750 | -- | -- |
| 75.83 | 0.406 | 9.81 | 0.361 | 0.816 | 0.659 | -- | -1.39 | 0.0414 | 3.56 | 21.4 | 750 | -- | -- |
| 81.72 | 0.421 | 9.78 | 0.729 | 0.83 | 0.734 | -- | -- | 0.108 | 3.58 | 21.2 | 751 | -- | -- |
| 110.58 | 0.49 | 9.82 | 0.327 | -- | 0.783 | -- | -1.37 | 0.0296 | -- | 21.4 | 960 | -- | -- |
| 99.97 | 0.469 | 9.73 | 0.974 | 0.839 | -- | -0.461 | -- | 0.319 | 2.87 | -- | -- | -- | -- |
| 100.66 | 0.47 | 9.73 | 0.985 | 0.84 | -- | -- | -- | 0.322 | 2.97 | -- | -- | -- | -- |
| 116.61 | 0.503 | 9.79 | 0.68 | -- | 0.865 | -- | -- | 0.0766 | -- | 21.4 | 973 | -- | -- |
| 86.54 | 0.433 | 9.81 | -- | 0.863 | 1.03 | -- | -- | -0.0746 | 3.04 | 21 | 9603 | -- | -- |
| 141.19 | 0.555 | 9.73 | 1.02 | -- | -- | -- | -- | 0.344 | -- | -- | -- | -- | -- |
| 126.22 | 0.526 | 9.76 | -- | 0.859 | -- | -- | -- | 0.212 | 2.98 | -- | -- | -- | -- |
| 121.91 | 0.514 | 9.81 | -- | -- | 1.28 | -- | -- | -0.0296 | -- | 19.56 | 9700 | -- | -- |
| 168.66 | 0.606 | 9.76 | -- | -- | -- | -- | -- | 0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 13 | 76.59 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 16 | 76.66 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 35 | 77.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 44 | 77.62 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 80 | 78.18 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 183 | 79.48 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 196 | 79.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 201 | 79.64 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 4 |
| 215 | 79.82 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 4 |
| 240 | 79.98 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 242 | 79.98 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 255 | 80.04 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 257 | 80.04 | temperature | 20 | 4320 | > th | dose dependent | rect. | 11 | 4 |
| 259 | 80.05 | temperature | 20 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 266 | 80.12 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 272 | 80.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 289 | 80.19 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 300 | 80.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 19 |
| 360 | 80.43 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 364 | 80.44 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 10 |
| 367 | 80.45 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 375 | 80.48 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 389 | 80.51 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 390 | 80.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 402 | 80.53 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 16 |
| 455 | 80.62 | temperature | 20 | 720 | < th | dose independent | sin | 11 | NA |
| 470 | 80.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 21 |
| 484 | 80.67 | temperature | 20 | 4320 | > th | dose dependent | sin | 22 | NA |
| 485 | 80.67 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 628 | 80.85 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 12 |
| 679 | 80.91 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 680 | 80.91 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 692 | 80.93 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 704 | 80.94 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 22 |
| 705 | 80.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 735 | 80.98 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 805 | 81.06 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 10 |
| 823 | 81.07 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 839 | 81.09 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 849 | 81.10 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 10 |
| 850 | 81.10 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 856 | 81.10 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 875 | 81.14 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 965 | 81.21 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 13 |