Os02g0702700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0702700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.34 | 0.442 | 3.72 | 0.246 | 0.614 | 1.96 | 0.217 | 1.99 | -0.121 | 5.26 | 14.02 | 131 | -- | -- |
| 89.81 | 0.441 | 3.75 | 0.0603 | 0.662 | 1.64 | 0.143 | -- | -0.187 | 5.11 | 19.76 | 131 | -- | -- |
| 88.44 | 0.438 | 3.73 | 0.226 | 0.612 | 1.95 | -- | 1.85 | -0.128 | 5.25 | 14.49 | 131 | -- | -- |
| 89.56 | 0.441 | 3.76 | 0.0316 | 0.644 | 1.61 | -- | -- | -0.196 | 5.13 | 19.72 | 127 | -- | -- |
| 101.73 | 0.472 | 3.72 | 0.321 | -- | 1.42 | -- | 1.54 | -0.058 | -- | 8.92 | 61 | -- | -- |
| 129.75 | 0.534 | 3.7 | 0.378 | 0.277 | -- | -0.0607 | -- | 0.0778 | 9.84 | -- | -- | -- | -- |
| 129.76 | 0.533 | 3.7 | 0.376 | 0.276 | -- | -- | -- | 0.0778 | 9.93 | -- | -- | -- | -- |
| 103.52 | 0.476 | 3.75 | 0.119 | -- | 1.29 | -- | -- | -0.116 | -- | 17.09 | 61 | -- | -- |
| 89.52 | 0.441 | 3.76 | -- | 0.641 | 1.61 | -- | -- | -0.196 | 5.25 | 19.81 | 130 | -- | -- |
| 134.35 | 0.542 | 3.71 | 0.372 | -- | -- | -- | -- | 0.0778 | -- | -- | -- | -- | -- |
| 133.48 | 0.54 | 3.71 | -- | 0.275 | -- | -- | -- | 0.036 | 9.83 | -- | -- | -- | -- |
| 103.88 | 0.476 | 3.75 | -- | -- | 1.32 | -- | -- | -0.133 | -- | 17.1 | 61 | -- | -- |
| 138 | 0.548 | 3.72 | -- | -- | -- | -- | -- | 0.0365 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.63 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 3 | 86.79 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 14 | 88.76 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 20 | 88.92 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 24 | 89.08 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 30 | 89.25 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 39 | 89.63 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 69 | 90.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 70 | 90.45 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 75 | 90.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 87 | 90.77 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 93 | 90.85 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 102 | 91.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 108 | 91.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 114 | 91.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 127 | 91.26 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 203 | 92.11 | temperature | 25 | 4320 | < th | dose independent | sin | 12 | NA |
| 207 | 92.12 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 226 | 92.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 232 | 92.31 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 326 | 93.01 | temperature | 25 | 4320 | > th | dose independent | sin | 13 | NA |
| 420 | 93.58 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 531 | 94.22 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 587 | 94.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 688 | 94.87 | temperature | 25 | 270 | < th | dose independent | rect. | 16 | 22 |
| 697 | 94.89 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 723 | 94.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 765 | 95.05 | temperature | 25 | 1440 | < th | dose independent | rect. | 23 | 13 |
| 814 | 95.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 848 | 95.29 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 22 |
| 887 | 95.36 | temperature | 25 | 270 | < th | dose independent | rect. | 19 | 23 |
| 890 | 95.36 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 891 | 95.36 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 904 | 95.41 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 905 | 95.41 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 6 |