Os02g0702600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF315 domain containing protein.
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Os02g0702600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF315 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.85 | 0.612 | 6.32 | -2.64 | 0.652 | 2.33 | -0.0825 | -2.63 | -1.03 | 23.7 | 25.97 | 1416 | -- | -- |
| 176.73 | 0.619 | 6.26 | -1.79 | 0.672 | 2.15 | -0.234 | -- | -0.834 | 0.0626 | 25.81 | 1416 | -- | -- |
| 169.87 | 0.607 | 6.32 | -2.64 | 0.652 | 2.33 | -- | -2.65 | -1.03 | 23.8 | 25.97 | 1415 | -- | -- |
| 176.2 | 0.618 | 6.25 | -1.81 | 0.661 | 2.16 | -- | -- | -0.809 | 23.7 | 25.9 | 1415 | -- | -- |
| 191.14 | 0.644 | 6.31 | -2.62 | -- | 2.65 | -- | -2.88 | -1.07 | -- | 25.92 | 1262 | -- | -- |
| 321.34 | 0.84 | 6.06 | -1.07 | 0.812 | -- | 0.0786 | -- | -0.0756 | 0.294 | -- | -- | -- | -- |
| 321.36 | 0.839 | 6.06 | -1.08 | 0.811 | -- | -- | -- | -0.0758 | 0.26 | -- | -- | -- | -- |
| 196.39 | 0.653 | 6.22 | -1.82 | -- | 2.41 | -- | -- | -0.806 | -- | 25.9 | 1247 | -- | -- |
| 257.83 | 0.748 | 6.18 | -- | 0.731 | 1.79 | -- | -- | -0.528 | 0.313 | 25.6 | 1427 | -- | -- |
| 362.78 | 0.89 | 6.05 | -1.05 | -- | -- | -- | -- | -0.0633 | -- | -- | -- | -- | -- |
| 351.91 | 0.878 | 6.04 | -- | 0.797 | -- | -- | -- | 0.0441 | 0.188 | -- | -- | -- | -- |
| 274.28 | 0.771 | 6.14 | -- | -- | 1.96 | -- | -- | -0.479 | -- | 25.82 | 1160 | -- | -- |
| 391.85 | 0.924 | 6.02 | -- | -- | -- | -- | -- | 0.0531 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.71 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 7 | 170.07 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 14 | 170.63 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 50 | 171.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 64 | 172.07 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 114 | 172.94 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 182 | 173.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 17 |
| 272 | 174.98 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 283 | 175.06 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 330 | 175.52 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 363 | 175.75 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 413 | 176.15 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 470 | 176.49 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 584 | 177.17 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 585 | 177.17 | humidity | 90 | 43200 | > th | dose dependent | sin | 16 | NA |
| 599 | 177.25 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 609 | 177.40 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 685 | 178.25 | humidity | 90 | 43200 | < th | dose independent | sin | 15 | NA |
| 705 | 178.41 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 748 | 178.87 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 19 |
| 752 | 178.88 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 21 |
| 764 | 178.96 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 19 |
| 786 | 179.06 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 867 | 179.50 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 22 |
| 888 | 179.65 | humidity | 90 | 43200 | > th | dose independent | sin | 15 | NA |
| 930 | 179.81 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 22 |
| 937 | 179.83 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 955 | 179.92 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 960 | 179.93 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 971 | 179.96 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 20 |
| 975 | 179.98 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 994 | 180.03 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 998 | 180.03 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 21 |