Os02g0702500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0702500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.48 | 0.191 | 11.8 | -0.0786 | 0.774 | -0.688 | 0.224 | 0.293 | 0.315 | 0.994 | 23.2 | 19 | -- | -- |
| 16.53 | 0.189 | 11.8 | -0.118 | 0.775 | -0.676 | 0.176 | -- | 0.303 | 1.01 | 23.25 | 18 | -- | -- |
| 16.66 | 0.19 | 11.8 | -0.103 | 0.775 | -0.692 | -- | 0.171 | 0.315 | 0.95 | 23.24 | 18 | -- | -- |
| 16.64 | 0.19 | 11.8 | -0.128 | 0.773 | -0.678 | -- | -- | 0.302 | 0.976 | 23.2 | 18 | -- | -- |
| 42 | 0.303 | 11.7 | 0.113 | -- | -1.39 | -- | 0.74 | 0.435 | -- | 23.24 | 18 | -- | -- |
| 23.34 | 0.226 | 11.8 | -0.243 | 1.02 | -- | 0.344 | -- | 0.205 | 1.47 | -- | -- | -- | -- |
| 23.81 | 0.229 | 11.8 | -0.255 | 1.02 | -- | -- | -- | 0.203 | 1.46 | -- | -- | -- | -- |
| 42.36 | 0.303 | 11.8 | 0.0105 | -- | -1.35 | -- | -- | 0.405 | -- | 23.24 | 7 | -- | -- |
| 17.04 | 0.192 | 11.8 | -- | 0.752 | -0.711 | -- | -- | 0.323 | 0.953 | 22.95 | 14 | -- | -- |
| 87.37 | 0.437 | 11.8 | -0.215 | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
| 25.52 | 0.236 | 11.8 | -- | 1.01 | -- | -- | -- | 0.232 | 1.45 | -- | -- | -- | -- |
| 42.36 | 0.303 | 11.8 | -- | -- | -1.35 | -- | -- | 0.403 | -- | 23.25 | 7 | -- | -- |
| 88.58 | 0.439 | 11.8 | -- | -- | -- | -- | -- | 0.249 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.20 | temperature | 10 | 90 | > th | dose dependent | sin | 1 | NA |
| 42 | 16.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 47 | 16.11 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 72 | 16.44 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 12 |
| 79 | 16.48 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 85 | 16.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 89 | 16.55 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 116 | 16.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 174 | 16.75 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 175 | 16.75 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 182 | 16.76 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 183 | 16.77 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 264 | 16.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 9 |
| 343 | 17.06 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 371 | 17.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 377 | 17.10 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 555 | 17.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 767 | 17.54 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 866 | 17.64 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 893 | 17.66 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 952 | 17.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 12 |