Os02g0702300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0702300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.92 | 0.443 | 5 | 3.84 | 0.218 | 128 | -0.596 | 257 | 0.0182 | 7.39 | 15.05 | 4033 | -- | -- |
| 158.25 | 0.59 | 3.3 | -0.65 | 0.258 | 1.62 | -0.941 | -- | -0.192 | 9.29 | 14.86 | 4986 | -- | -- |
| 89.85 | 0.441 | 5 | 3.81 | 0.212 | 128 | -- | 257 | 0.0129 | 7.56 | 15.05 | 4027 | -- | -- |
| 96 | 0.456 | 3.28 | 0.0825 | 0.273 | 3.8 | -- | -- | -0.0086 | 7.99 | 15.85 | 4634 | -- | -- |
| 92.19 | 0.447 | 4.99 | 3.71 | -- | 130 | -- | 260 | -0.0128 | -- | 15.03 | 4025 | -- | -- |
| 163.2 | 0.599 | 3.31 | -0.72 | 0.243 | -- | -0.784 | -- | -0.21 | 8.86 | -- | -- | -- | -- |
| 165.26 | 0.602 | 3.31 | -0.747 | 0.247 | -- | -- | -- | -0.21 | 8.63 | -- | -- | -- | -- |
| 99.03 | 0.463 | 3.26 | 0.0879 | -- | 3.82 | -- | -- | 0.00967 | -- | 15.86 | 4735 | -- | -- |
| 95.94 | 0.456 | 3.26 | -- | 0.244 | 3.8 | -- | -- | -0.00646 | 8.09 | 15.78 | 4629 | -- | -- |
| 168.7 | 0.607 | 3.31 | -0.747 | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
| 179.97 | 0.628 | 3.29 | -- | 0.245 | -- | -- | -- | -0.127 | 8.85 | -- | -- | -- | -- |
| 99.17 | 0.464 | 3.27 | -- | -- | 3.76 | -- | -- | -0.0019 | -- | 15.82 | 4720 | -- | -- |
| 183.4 | 0.632 | 3.29 | -- | -- | -- | -- | -- | -0.125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.13 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 14 | 3 |
| 4 | 83.99 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 5 | 84.03 | temperature | 15.0 | 4320 | < th | dose dependent | sin | 22 | NA |
| 9 | 84.71 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 6 | 16 |
| 17 | 84.86 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 6 | 13 |
| 21 | 85.09 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 9 | 16 |
| 24 | 85.14 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 9 | 14 |
| 148 | 87.32 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 183 | 89.03 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 12 | 6 |
| 215 | 90.49 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 219 | 90.51 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 319 | 93.31 | temperature | 15.0 | 4320 | < th | dose independent | sin | 21 | NA |
| 322 | 93.34 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 12 | 11 |
| 351 | 93.68 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 14 | 9 |
| 424 | 94.99 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 16 |
| 432 | 95.08 | temperature | 15.0 | 4320 | > th | dose independent | sin | 21 | NA |
| 437 | 95.12 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 445 | 95.30 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 12 |
| 459 | 95.53 | temperature | 15.0 | 4320 | < th | dose dependent | no | NA | NA |
| 470 | 95.58 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 12 | 23 |
| 484 | 95.83 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 16 | 23 |
| 505 | 96.14 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 543 | 96.58 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 21 | 23 |
| 560 | 96.75 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 564 | 96.78 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 568 | 96.89 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 584 | 96.97 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 602 | 97.09 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 2 | 4 |
| 657 | 97.44 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 745 | 98.11 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 1 | 1 |
| 748 | 98.11 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 1 | 1 |
| 763 | 98.26 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 855 | 98.86 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 22 | 8 |
| 899 | 99.12 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 983 | 99.67 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |