Os02g0700500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter I family protein.
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Os02g0700500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amino acid/polyamine transporter I family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.45 | 0.421 | 7.23 | 0.772 | 2.12 | 0.804 | 0.422 | -0.344 | 0.391 | 17.4 | 19.1 | 10 | -- | -- |
| 81.08 | 0.419 | 7.23 | 0.784 | 2.12 | 0.813 | 0.472 | -- | 0.393 | 17.4 | 18.96 | 9 | -- | -- |
| 80.89 | 0.419 | 7.23 | 0.77 | 2.12 | 0.803 | -- | -0.371 | 0.393 | 17.4 | 19.07 | 9 | -- | -- |
| 81.46 | 0.42 | 7.24 | 0.785 | 2.1 | 0.799 | -- | -- | 0.385 | 17.4 | 19.22 | 6 | -- | -- |
| 300.52 | 0.812 | 7.2 | 0.702 | -- | 0.615 | -- | -0.267 | 0.359 | -- | 6.581 | 6 | -- | -- |
| 92.44 | 0.451 | 7.25 | 0.764 | 2.17 | -- | 0.209 | -- | 0.383 | 18.9 | -- | -- | -- | -- |
| 92.55 | 0.451 | 7.25 | 0.761 | 2.17 | -- | -- | -- | 0.383 | 18.9 | -- | -- | -- | -- |
| 300.96 | 0.812 | 7.2 | 0.705 | -- | 0.616 | -- | -- | 0.36 | -- | 6.418 | 4 | -- | -- |
| 97.61 | 0.46 | 7.26 | -- | 2.1 | 0.754 | -- | -- | 0.3 | 17.6 | 19.24 | 6 | -- | -- |
| 340.09 | 0.862 | 7.2 | 0.715 | -- | -- | -- | -- | 0.343 | -- | -- | -- | -- | -- |
| 107.8 | 0.486 | 7.27 | -- | 2.16 | -- | -- | -- | 0.299 | 18.9 | -- | -- | -- | -- |
| 314.07 | 0.828 | 7.22 | -- | -- | 0.62 | -- | -- | 0.28 | -- | 6.78 | 2 | -- | -- |
| 353.58 | 0.878 | 7.22 | -- | -- | -- | -- | -- | 0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.82 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 22 | 22 |
| 4 | 73.07 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 5 |
| 8 | 73.48 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 9 | 73.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 19 |
| 12 | 73.59 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 19 |
| 13 | 73.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 5 |
| 14 | 73.75 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 5 |
| 15 | 73.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 19 |
| 18 | 73.85 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 5 |
| 21 | 73.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 19 |
| 25 | 74.02 | radiation | 20.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 28 | 74.09 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 5 |
| 33 | 74.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 5 |
| 35 | 74.21 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 9 |
| 48 | 74.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 5 |
| 49 | 74.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 5 |
| 51 | 74.46 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 3 |
| 55 | 74.51 | radiation | 1.0 | 30 | > th | dose independent | sin | 3 | NA |
| 56 | 74.54 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 57 | 74.62 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 7 |
| 61 | 74.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 64 | 74.75 | radiation | 1.0 | 30 | < th | dose independent | sin | 3 | NA |
| 65 | 74.82 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 68 | 74.87 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 69 | 74.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 18 |
| 70 | 74.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 73 | 74.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 5 |
| 74 | 74.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 9 |
| 75 | 74.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 79 | 74.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 17 |
| 88 | 75.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 3 |
| 89 | 75.12 | radiation | 10.0 | 270 | < th | dose independent | rect. | 18 | 3 |
| 90 | 75.12 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 18 | 3 |
| 93 | 75.13 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 3 |
| 97 | 75.13 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 21 |
| 104 | 75.16 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 106 | 75.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 108 | 75.20 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 109 | 75.20 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 116 | 75.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 17 |
| 119 | 75.28 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 7 |
| 120 | 75.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 17 |
| 121 | 75.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 21 |
| 125 | 75.31 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 3 |
| 126 | 75.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 6 |
| 128 | 75.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 6 |
| 139 | 75.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 21 |
| 140 | 75.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 19 |
| 141 | 75.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 19 |
| 143 | 75.44 | radiation | 30.0 | 270 | < th | dose independent | rect. | 16 | 7 |
| 150 | 75.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 3 |
| 155 | 75.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 17 |
| 157 | 75.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 5 |
| 160 | 75.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 179 | 75.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 18 |
| 185 | 75.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 3 |
| 191 | 75.70 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 206 | 75.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 3 |
| 207 | 75.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 3 |
| 228 | 75.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 5 |
| 236 | 75.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 3 |
| 238 | 75.98 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 11 |
| 240 | 75.99 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 20 |
| 254 | 76.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 9 |
| 255 | 76.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 9 |
| 256 | 76.09 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 257 | 76.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 15 |
| 277 | 76.15 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 3 |
| 288 | 76.22 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 292 | 76.26 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 15 |
| 295 | 76.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 298 | 76.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 317 | 76.44 | radiation | 20.0 | 10 | < th | dose independent | rect. | 22 | 22 |
| 329 | 76.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 15 |
| 330 | 76.49 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 18 |
| 333 | 76.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 15 |
| 337 | 76.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 15 |
| 346 | 76.53 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 354 | 76.57 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 403 | 76.76 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 16 |
| 446 | 76.94 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 501 | 77.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 21 |
| 505 | 77.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 21 |
| 521 | 77.19 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 5 |
| 522 | 77.19 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 9 |
| 550 | 77.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 569 | 77.34 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 4 |
| 579 | 77.38 | wind | 1.0 | 90 | > th | dose independent | rect. | 13 | 6 |
| 623 | 77.55 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 649 | 77.66 | humidity | 70.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 688 | 77.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 689 | 77.79 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 690 | 77.79 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 693 | 77.79 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 697 | 77.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 16 |
| 705 | 77.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 718 | 77.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 15 |
| 757 | 77.89 | wind | 9.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 768 | 77.91 | temperature | 10.0 | 90 | > th | dose independent | rect. | 13 | 6 |
| 770 | 77.91 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 774 | 77.91 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 18 |
| 800 | 77.95 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 826 | 78.03 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 18 |
| 836 | 78.06 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 13 | 6 |
| 838 | 78.06 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 13 | 6 |
| 847 | 78.09 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 7 |
| 873 | 78.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 16 |
| 887 | 78.16 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 1 |
| 997 | 78.38 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 13 | 6 |