Os02g0699500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0699500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181.92 | 0.634 | 6.81 | 0.828 | 1.31 | 1.03 | -0.553 | -0.93 | -0.396 | 21.6 | 23.2 | 15 | -- | -- |
| 182.91 | 0.635 | 6.82 | 0.713 | 1.3 | 1.21 | -0.738 | -- | -0.426 | 21.6 | 22.61 | 7 | -- | -- |
| 182.8 | 0.635 | 6.8 | 0.883 | 1.31 | 0.992 | -- | -1.25 | -0.388 | 21.6 | 23.2 | 15 | -- | -- |
| 184.92 | 0.638 | 6.82 | 0.743 | 1.3 | 1.23 | -- | -- | -0.423 | 21.5 | 22.6 | 6 | -- | -- |
| 278.31 | 0.781 | 6.76 | 0.959 | -- | 1.67 | -- | -0.716 | -0.318 | -- | 23.25 | 10 | -- | -- |
| 199.86 | 0.663 | 6.86 | 0.477 | 1.42 | -- | -0.795 | -- | -0.571 | 21.9 | -- | -- | -- | -- |
| 202.3 | 0.666 | 6.86 | 0.508 | 1.42 | -- | -- | -- | -0.57 | 21.9 | -- | -- | -- | -- |
| 279.05 | 0.781 | 6.77 | 0.878 | -- | 1.76 | -- | -- | -0.335 | -- | 23.2 | 3 | -- | -- |
| 198.31 | 0.659 | 6.85 | -- | 1.33 | 0.948 | -- | -- | -0.538 | 21.7 | 22.4 | 8 | -- | -- |
| 323.1 | 0.84 | 6.82 | 0.524 | -- | -- | -- | -- | -0.57 | -- | -- | -- | -- | -- |
| 209.11 | 0.676 | 6.87 | -- | 1.42 | -- | -- | -- | -0.626 | 21.9 | -- | -- | -- | -- |
| 297.96 | 0.807 | 6.8 | -- | -- | 1.46 | -- | -- | -0.466 | -- | 23.2 | 3 | -- | -- |
| 330.34 | 0.848 | 6.83 | -- | -- | -- | -- | -- | -0.628 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.46 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 21 |
| 5 | 176.49 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 8 | 177.42 | temperature | 20.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 13 | 178.08 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 23 |
| 14 | 178.08 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 20 | 178.92 | wind | 3.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 22 | 179.03 | wind | 1.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 25 | 179.26 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 26 | 179.33 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 6 | 3 |
| 28 | 179.47 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 15 |
| 32 | 179.54 | temperature | 20.0 | 30 | > th | dose independent | rect. | 11 | 18 |
| 33 | 179.54 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 15 |
| 44 | 179.80 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 54 | 180.05 | humidity | 80.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 57 | 180.12 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 61 | 180.19 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 62 | 180.19 | temperature | 25.0 | 10 | < th | dose dependent | sin | 15 | NA |
| 63 | 180.22 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 18 |
| 67 | 180.31 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 72 | 180.36 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 10 |
| 77 | 180.40 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 92 | 180.50 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 96 | 180.51 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 101 | 180.53 | wind | 7.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 103 | 180.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 105 | 180.53 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 106 | 180.53 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 109 | 180.53 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 112 | 180.53 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 1 |
| 113 | 180.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 114 | 180.53 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 116 | 180.53 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 124 | 180.57 | radiation | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 128 | 180.58 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 131 | 180.61 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 135 | 180.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 138 | 180.63 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 141 | 180.63 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 142 | 180.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 149 | 180.65 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 170 | 180.77 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 172 | 180.78 | temperature | 25.0 | 90 | > th | dose independent | rect. | 6 | 3 |
| 177 | 180.87 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 190 | 181.07 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 208 | 181.14 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 221 | 181.21 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 239 | 181.36 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 5 |
| 248 | 181.47 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 23 | 10 |
| 274 | 181.76 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 277 | 181.76 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 343 | 182.23 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 10 |
| 353 | 182.26 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 9 | 21 |
| 368 | 182.37 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 21 |
| 372 | 182.39 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 9 | 18 |
| 381 | 182.46 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 390 | 182.50 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 19 |
| 404 | 182.57 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 4 | 22 |
| 455 | 182.83 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 11 |
| 497 | 182.98 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 506 | 183.04 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 20 |
| 512 | 183.06 | temperature | 20.0 | 30 | < th | dose independent | rect. | 17 | 10 |
| 537 | 183.14 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 11 | 18 |
| 561 | 183.22 | radiation | 10.0 | 30 | > th | dose independent | rect. | 6 | 3 |
| 612 | 183.34 | humidity | 90.0 | 720 | < th | dose independent | rect. | 9 | 3 |
| 634 | 183.41 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 643 | 183.44 | radiation | 10.0 | 30 | < th | dose independent | rect. | 24 | 14 |
| 690 | 183.61 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 23 |
| 789 | 183.90 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 2 |
| 805 | 183.95 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 15 | 21 |
| 833 | 184.04 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 14 | 22 |
| 860 | 184.11 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 17 | 19 |
| 873 | 184.15 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 24 | 14 |
| 885 | 184.17 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 3 |
| 926 | 184.28 | temperature | 20.0 | 30 | < th | dose independent | sin | 15 | NA |
| 970 | 184.34 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 975 | 184.37 | temperature | 20.0 | 90 | > th | dose independent | sin | 17 | NA |
| 977 | 184.38 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 993 | 184.44 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |