Os02g0698800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WRKY transcription factor 66.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0698800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : WRKY transcription factor 66.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.22 | 0.355 | 2.87 | 0.167 | 0.062 | -0.773 | -0.124 | -3.27 | 0.0321 | 2.9 | 6.686 | 1427 | -- | -- |
| 58.55 | 0.356 | 2.83 | 0.115 | 0.0431 | -0.244 | 0.0247 | -- | 0.0439 | 3.07 | 4.5 | 1358 | -- | -- |
| 57.27 | 0.352 | 2.87 | 0.169 | 0.0611 | -0.765 | -- | -3.22 | 0.0329 | 2.75 | 6.684 | 1426 | -- | -- |
| 58.45 | 0.356 | 2.83 | 0.119 | 0.0368 | -0.285 | -- | -- | 0.0396 | 2.9 | 4.139 | 1237 | -- | -- |
| 57.49 | 0.353 | 2.87 | 0.171 | -- | -0.765 | -- | -3.19 | 0.035 | -- | 6.669 | 1426 | -- | -- |
| 59.42 | 0.361 | 2.83 | 0.0432 | 0.0749 | -- | -0.0417 | -- | 0.0457 | 2.17 | -- | -- | -- | -- |
| 59.42 | 0.361 | 2.83 | 0.0445 | 0.0747 | -- | -- | -- | 0.046 | 2.02 | -- | -- | -- | -- |
| 58.5 | 0.356 | 2.83 | 0.122 | -- | -0.301 | -- | -- | 0.0406 | -- | 3.899 | 1216 | -- | -- |
| 58.75 | 0.357 | 2.83 | -- | 0.0457 | -0.231 | -- | -- | 0.0302 | 2.8 | 3.84 | 1258 | -- | -- |
| 59.76 | 0.361 | 2.83 | 0.0476 | -- | -- | -- | -- | 0.0478 | -- | -- | -- | -- | -- |
| 59.48 | 0.361 | 2.83 | -- | 0.0755 | -- | -- | -- | 0.0411 | 2.04 | -- | -- | -- | -- |
| 58.85 | 0.357 | 2.83 | -- | -- | -0.248 | -- | -- | 0.0295 | -- | 3.8 | 1211 | -- | -- |
| 59.82 | 0.361 | 2.83 | -- | -- | -- | -- | -- | 0.0425 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.72 | temperature | 20.0 | 10 | < th | dose independent | rect. | 8 | 2 |
| 7 | 51.72 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 108 | 53.99 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 112 | 54.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 115 | 54.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 119 | 54.00 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 125 | 54.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 126 | 54.00 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 146 | 54.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 159 | 54.06 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 160 | 54.06 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 173 | 54.10 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 179 | 54.13 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 185 | 54.16 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 186 | 54.16 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 187 | 54.17 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 193 | 54.19 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 199 | 54.23 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 203 | 54.24 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 206 | 54.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 208 | 54.25 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 209 | 54.25 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 213 | 54.25 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 215 | 54.25 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 220 | 54.25 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 221 | 54.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 222 | 54.25 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 227 | 54.25 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 230 | 54.27 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 231 | 54.29 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 236 | 54.29 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 238 | 54.29 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 251 | 54.41 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 264 | 54.50 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 265 | 54.51 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 271 | 54.58 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 275 | 54.70 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 337 | 55.49 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 342 | 55.66 | wind | 3.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 348 | 55.83 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 353 | 55.92 | wind | 7.0 | 720 | > th | dose independent | rect. | 15 | 1 |
| 356 | 55.97 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 369 | 56.17 | wind | 7.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 370 | 56.23 | wind | 9.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 378 | 56.38 | wind | 7.0 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 380 | 56.40 | wind | 3.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 385 | 56.46 | wind | 3.0 | 270 | > th | dose independent | rect. | 20 | 1 |
| 386 | 56.46 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 4 |
| 390 | 56.48 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 391 | 56.49 | humidity | 80.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 395 | 56.56 | wind | 7.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 400 | 56.65 | wind | 5.0 | 10 | > th | dose independent | rect. | 1 | 8 |
| 401 | 56.66 | wind | 5.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 420 | 56.77 | wind | 9.0 | 720 | > th | dose independent | rect. | 12 | 4 |
| 422 | 56.79 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 425 | 56.81 | wind | 7.0 | 1440 | < th | dose independent | rect. | 10 | 7 |
| 432 | 56.85 | temperature | 15.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 446 | 56.85 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 472 | 56.91 | wind | 7.0 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 483 | 56.95 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 10 | 6 |
| 503 | 56.99 | wind | 5.0 | 10 | > th | dose dependent | rect. | 1 | 8 |
| 516 | 57.01 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 519 | 57.01 | wind | 5.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 526 | 57.02 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 20 |
| 584 | 57.05 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 4 |
| 588 | 57.05 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 595 | 57.06 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 5 | 11 |
| 602 | 57.08 | wind | 7.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 615 | 57.08 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 19 | 2 |
| 626 | 57.09 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 15 |
| 640 | 57.10 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 12 |
| 656 | 57.11 | humidity | 80.0 | 270 | > th | dose independent | rect. | 20 | 1 |
| 668 | 57.11 | wind | 5.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 703 | 57.13 | wind | 7.0 | 720 | < th | dose independent | rect. | 21 | 23 |
| 707 | 57.13 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 10 | 10 |
| 738 | 57.16 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 4 |
| 741 | 57.16 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 5 | 15 |
| 743 | 57.17 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 746 | 57.17 | wind | 7.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 755 | 57.18 | wind | 7.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 822 | 57.23 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 4 |
| 830 | 57.23 | wind | 7.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 831 | 57.23 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 854 | 57.24 | wind | 1.0 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 907 | 57.27 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 946 | 57.29 | wind | 7.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 947 | 57.29 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 954 | 57.29 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 956 | 57.29 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 983 | 57.30 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 18 | 22 |
| 995 | 57.31 | wind | 7.0 | 1440 | < th | dose independent | rect. | 10 | 19 |